| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is htpG
Identifier: 209694394
GI number: 209694394
Start: 902909
End: 904807
Strand: Direct
Name: htpG
Synonym: VSAL_I0814
Alternate gene names: 209694394
Gene position: 902909-904807 (Clockwise)
Preceding gene: 209694392
Following gene: 209694395
Centisome position: 27.15
GC content: 38.23
Gene sequence:
>1899_bases ATGAGCGAACAAACTATTAATAACAAAGAAACACGCGGCTTTCAGTCAGAAGTTAAACAACTACTTCATCTAATGATTCA TTCTTTATATTCAAATAAAGAAATATTTTTACGTGAGCTTATTTCAAACGCATCAGATGCTTCAGATAAATTACGTTTTA AAGCGTTATCAAACGGCGATTTATACGAAGGCAATGCCGATTTAGGTGTGAAAATTTCGTTTAATGTTGAAGCGAATACT CTAACCATTTCAGATAATGGTATTGGTATGGGTCGTGAAGATGTTATTGAACATTTGGGCACTATCGCGAAATCTGGTAC GGCTGATTTCTTCTCAAAATTGTCAGAAGATCAAAGTAAAGATTCTCAACTTATCGGTCAGTTTGGCGTTGGTTTCTACT CTGCATTTATTGTCGCAGATGCGGTAACGGTTCGTACTCGTGTTGCTGGTGCAGCAAAAGATCAGGCAGTGCAATGGCAC TCTGAAGGCGAAGGCGATTACACAATAGAAGATGTGACTAAAGAATCTCGTGGTACGGACATTATTCTTCACATGCGTGA TGAAGGTAAAGAGTTCTTAAGTGAGTGGCGTCTAAAAGAAGTGATTGGTAAATATTCAGATCACATCGGCATCCCGGTTT CTATTTGGACTGTTGAAAAAGACGAAGAAGGTAAAGAGACTGAAGGTAAGTGGGAGCAAGTAAATAAAGCTCAAGCGCTT TGGACTCGTAATAAATCAGAAATTGAAGACGCAGAATACCAAGAATTTTATAAGCATGTATCTCATGACTTTGCTGATCC ACTGACGTGGAGTCACAATAAAGTAGAAGGTAAAAACGACTACACTAGCTTATTGTATATTCCAGCTAAAGCTCCGTTTG ATATGATGAATCGTGATCATAAAAGTGGTCTTAAACTTTATGTTCAACGCGTGTTTGTTATGGATGATGCTGAGCAGTTC ATGCCGAGTTACCTACGATTTGTTAAAGGATTAATCGACTCGAATGATTTGGCTCTGAATGTTTCTCGCGAAATACTTCA AGACAACAAAGTGACTCAATCATTACGTGGTGCGTGTACAAAACGTGTATTAAGTATGCTTGAGAAGATAGCTAAAAAAG ATAATGATAAATATTTATCTTTTTGGAAAGAGTTTGGGCAAGTATTAAAAGAAGGTTTGGCTGAAGATTTCGCCAATAAA GATAAAATTGCAGGCCTACTACGTTTTGCTTCTACTAATAAAGACAGCTCAGAACAAGCGATTAGCCTTGCGAGTTATGT TGAGCGCATGAAAGAAGATCAAGATAAGATTTTCTACCTAACATCTGATAGCTATGCGGCTGCGAAAAATAGCCCACACT TAGAGCAATTCAAATCAAAAGGCATTGAAGTTGTCTTAATGTATGACCGCATCGATGAGTGGCTAATGAGCTACTTAACT GAATTTGATGGCAAACAATTCCAATCAATTACCAAAGCTGGTTTGGATTTAAGCAAATTTGAAAACGAAGCGGAAAAAGA AAAACAAAAAGAAACAACAGAAGAATTTAAGTCAGTAGTTGAACGTACAAAAGCTTACTTAGGTGATCGTGTTAAAGAGG TTCGTACTACGTTTAAATTAGCGACTACGCCAGCCGTTGTTGTTACCGATGATTTTGAAATGGGTACACAAATGGCGAAA CTTTTAGAAGCGGCTGGTCAAGCGGCGCCTGAAGTGAAGTACATTTTTGAAATTAACCCTGAGCATGCCCTGATTAAGCA AATGGCAGATGAAGCGGATGAAGAAGCATTTGGCCGTTGGGTTGAAATGCTACTTGGTCAAGCGATGCTAGCAGAGCGCG GCTCTTTAGATGATCCATCACAATTTCTAAGTGCAATGAATCAGTTATTATCAAAGTAA
Upstream 100 bases:
>100_bases AAAAACACCGTTTTTTACATTGGTTTACCTTGAATTGATATTTTATGCCCTTATTACTTTATCAAGTTAATAAACATTAT CCTTTTTTGGAGTTTTATAG
Downstream 100 bases:
>100_bases TTGAGATATAACCGTAAACAGTAAAATTAATGAGATCTTGAGTGACAATAGTGCACTAAGGTCTCATTGTTTTTTATTGG GATTAGTTACATTCTTACTC
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MSEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKISFNVEANT LTISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWH SEGEGDYTIEDVTKESRGTDIILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDEEGKETEGKWEQVNKAQAL WTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPFDMMNRDHKSGLKLYVQRVFVMDDAEQF MPSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACTKRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFANK DKIAGLLRFASTNKDSSEQAISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLT EFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAK LLEAAGQAAPEVKYIFEINPEHALIKQMADEADEEAFGRWVEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK
Sequences:
>Translated_632_residues MSEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKISFNVEANT LTISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWH SEGEGDYTIEDVTKESRGTDIILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDEEGKETEGKWEQVNKAQAL WTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPFDMMNRDHKSGLKLYVQRVFVMDDAEQF MPSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACTKRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFANK DKIAGLLRFASTNKDSSEQAISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLT EFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAK LLEAAGQAAPEVKYIFEINPEHALIKQMADEADEEAFGRWVEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK >Mature_631_residues SEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGDLYEGNADLGVKISFNVEANTL TISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWHS EGEGDYTIEDVTKESRGTDIILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDEEGKETEGKWEQVNKAQALW TRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPFDMMNRDHKSGLKLYVQRVFVMDDAEQFM PSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACTKRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFANKD KIAGLLRFASTNKDSSEQAISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLTE FDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKL LEAAGQAAPEVKYIFEINPEHALIKQMADEADEEAFGRWVEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=631, Percent_Identity=37.5594294770206, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI20149594, Length=670, Percent_Identity=36.1194029850746, Blast_Score=396, Evalue=1e-110, Organism=Homo sapiens, GI155722983, Length=637, Percent_Identity=35.7927786499215, Blast_Score=371, Evalue=1e-102, Organism=Homo sapiens, GI154146191, Length=399, Percent_Identity=35.8395989974937, Blast_Score=249, Evalue=6e-66, Organism=Homo sapiens, GI153792590, Length=399, Percent_Identity=35.8395989974937, Blast_Score=248, Evalue=2e-65, Organism=Escherichia coli, GI1786679, Length=625, Percent_Identity=66.88, Blast_Score=876, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=670, Percent_Identity=37.0149253731343, Blast_Score=435, Evalue=1e-122, Organism=Caenorhabditis elegans, GI17542208, Length=673, Percent_Identity=36.2555720653789, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI115535205, Length=644, Percent_Identity=33.8509316770186, Blast_Score=323, Evalue=1e-88, Organism=Caenorhabditis elegans, GI115535167, Length=426, Percent_Identity=37.0892018779343, Blast_Score=269, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6323840, Length=677, Percent_Identity=36.6322008862629, Blast_Score=426, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6325016, Length=412, Percent_Identity=36.8932038834951, Blast_Score=278, Evalue=3e-75, Organism=Drosophila melanogaster, GI17647529, Length=682, Percent_Identity=36.3636363636364, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI21357739, Length=681, Percent_Identity=37.7386196769457, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI24586016, Length=650, Percent_Identity=32.9230769230769, Blast_Score=353, Evalue=2e-97,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_ALISL (B6EHJ9)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262322.1 - GeneID: 6989314 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0814 - HOGENOM: HBG631012 - OMA: DAQELNK - ProtClustDB: PRK05218 - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71668; Mature: 71537
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGD CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHEEEEEECCCC LYEGNADLGVKISFNVEANTLTISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSK EECCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH DSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWHSEGEGDYTIEDVTKESRGTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCEEHHHHHHCCCCCE IILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDEEGKETEGKWEQVNKAQAL EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH WTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPFDMMNRDH HCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH KSGLKLYVQRVFVMDDAEQFMPSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH KRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFANKDKIAGLLRFASTNKDSSEQA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH ISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLT HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHH EFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKL HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEVKYIFEINPEHALIKQMADEADEEAFGRW ECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHH VEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDASDKLRFKALSNGD CCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHEEEEEECCCC LYEGNADLGVKISFNVEANTLTISDNGIGMGREDVIEHLGTIAKSGTADFFSKLSEDQSK EECCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH DSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWHSEGEGDYTIEDVTKESRGTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCEEHHHHHHCCCCCE IILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDEEGKETEGKWEQVNKAQAL EEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH WTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPFDMMNRDH HCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH KSGLKLYVQRVFVMDDAEQFMPSYLRFVKGLIDSNDLALNVSREILQDNKVTQSLRGACT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH KRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFANKDKIAGLLRFASTNKDSSEQA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH ISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFKSKGIEVVLMYDRIDEWLMSYLT HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHHH EFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFKSVVERTKAYLGDRVKEVRTTFKL HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEVKYIFEINPEHALIKQMADEADEEAFGRW ECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHH VEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA