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The map label for this gene is uidR [C]

Identifier: 209693875

GI number: 209693875

Start: 314332

End: 314976

Strand: Direct

Name: uidR [C]

Synonym: VSAL_I0267

Alternate gene names: 209693875

Gene position: 314332-314976 (Clockwise)

Preceding gene: 209693874

Following gene: 209693876

Centisome position: 9.45

GC content: 37.98

Gene sequence:

>645_bases
ATGAAAACAAAAGACAGAATAATCCTCGGTGCCTTAACCCTTTTTAACCAAAATGGTGAACGAAATATCACCACCAACCA
TATTTCGGCGCATCTTGAAATCAGTCCGGGTAATTTGTATTACCACTTTGGCAATAAAGAAGCGATCATCAATAGTATTT
TTGATAACTATGCGAACGAGCTAAAAACACGCTTTAAACCAATGGCAGAAGAAGACCAATCGACAATGCCTAGTGTACAG
ATCATGTTGAGTTATTTAGATTCGATTTTTGAGTTGATGTGGAACTACCGTTTCTTTTACGCCAATTTACCCGATATCTT
AAGCAGAGATACGGAGTTAAAAGAAAAATACACCAAAGCACAAGAATCCCTAAACGATAACCTTATTAGTATCATGAAAG
GATTTAGAACTTCAGGCCTTATTGCGCTTGAAGACGATGAATTACTCGCGCTAACCAAAACGTTACACCTCGTATCGTCA
TGCTGGATAAGTTACCAAACCGCACAATTGTCAGATAAAGAAATAACAGAGGCGGTGGTTTATCAAGGCATGTTACAAAT
GCTAAATGTCGTTAGACCAATAGCAACAGAGCAAGGCAGAGCACAGATATTAGAATTAGAAGCGCATTATCAAAGCAGAT
TATAG

Upstream 100 bases:

>100_bases
CTTATAGTCTCTAGTTAGCGCAGCGTATAGCTCCTAGTTTCATATAACTTTTTCAGTTACAATTTTGAAATATTTGAATT
TATTTGGCGCGGAAAAAGCA

Downstream 100 bases:

>100_bases
AATTCAGAAAAGCTAGAGACTAGAGACTATAAAAACGTGTATAGCTGGTGTAATAATCATGTCTGATAATGCTCTTGCTC
TTATAGAAGCGAAGCGCTCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGNKEAIINSIFDNYANELKTRFKPMAEEDQSTMPSVQ
IMLSYLDSIFELMWNYRFFYANLPDILSRDTELKEKYTKAQESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSS
CWISYQTAQLSDKEITEAVVYQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL

Sequences:

>Translated_214_residues
MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGNKEAIINSIFDNYANELKTRFKPMAEEDQSTMPSVQ
IMLSYLDSIFELMWNYRFFYANLPDILSRDTELKEKYTKAQESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSS
CWISYQTAQLSDKEITEAVVYQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL
>Mature_214_residues
MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGNKEAIINSIFDNYANELKTRFKPMAEEDQSTMPSVQ
IMLSYLDSIFELMWNYRFFYANLPDILSRDTELKEKYTKAQESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSS
CWISYQTAQLSDKEITEAVVYQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24639; Mature: 24639

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGNKEAIINSIFDNYANE
CCCCHHHHHHHHHHHCCCCCCCCEECEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LKTRFKPMAEEDQSTMPSVQIMLSYLDSIFELMWNYRFFYANLPDILSRDTELKEKYTKA
HHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHH
QESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSSCWISYQTAQLSDKEITEAVV
HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGNKEAIINSIFDNYANE
CCCCHHHHHHHHHHHCCCCCCCCEECEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LKTRFKPMAEEDQSTMPSVQIMLSYLDSIFELMWNYRFFYANLPDILSRDTELKEKYTKA
HHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHCCCHHHHHHHHHH
QESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSSCWISYQTAQLSDKEITEAVV
HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA