Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693876

Identifier: 209693876

GI number: 209693876

Start: 315135

End: 316286

Strand: Direct

Name: 209693876

Synonym: VSAL_I0268

Alternate gene names: NA

Gene position: 315135-316286 (Clockwise)

Preceding gene: 209693875

Following gene: 209693877

Centisome position: 9.48

GC content: 40.89

Gene sequence:

>1152_bases
ATGAAACGCATCATCCTTAGTACCATCCTATTCATATCAAACCCACTTACCGCCGCCATTGAGCCTTTATTTGACACACC
AAAAGACATGGAGCCGACTTGGGTTGATAACCTATTAGACGTTTTTGGTGCTGATGGTGGTTTTGATGAAAGCAAAGTCA
TCGATATGAGTTACTTACCCACCGCGTATTACACACCAGAGAAAAAGTTTGGTGTCGGTTTGCTGATGGTTGGTTTATAT
AAAACTGAAAATGCTGCGGTTGAAGAACAGCCTTCTTCATTAGTGGTCAACTCATTCGTCTCAATGAATAAATCCTATGG
TGTCTCAGTCGAGAACATGAGCTTTTTCAATCAAGGAAAGCAACGACTATTACTTGAGTTAGAACTGCATAATGAAGCCG
CAGTGTATTATGGCAAAGGAATCGAACAAGGAAATAAAGACAGTAACTATCATGAGTTTGACGAACAGGTATATAGTTTT
AAACCTCGTTGGATGACAGAGGTCGCTAATAACTATTTCATTGGTATCGGTGCCGATTTAACTTACGCCAAAGCGGAAAA
CTTAGAATTGGTCACTACAGGTCGCTCATATCAATCAGACCGATACCTGCCTGATAACCTTAGCTCAGGAGTTATTATTA
CGAGTGTGTATGACTCTAGAGATTATCGTCTTAATGCCAAAAAAGGCTGGTTACTTCAGTTTGATGCCGGTTTGTATCAC
AATGATAAAGCAGATTCTTTTTCAACCTATGATTTAGAAGTCGCTAATTATATCGATTTAAACGGTTTGCCGGGCCTTAT
CGCATGGCAAATTCAAGGACACTTTACACAGGGTGAAGCTCCTTGGAATATAATGCCAGATCTCGGTGGTTCAAGTGCGA
TGAGAGGCTACATTAAAGGCAGATACAGAGACGATCAAATGATGATGGGACAAGTAGAATACCGACTGCCAATTTTCCAG
CGCTATGGCATGGTTTTCTGGGGAGCGGTTGGCAGTGTTGCCCCAAGCGTTAGTGAGTTAAGCGACGAATTAATGACATC
TTACGGTACGGGCTTTCGATTTAAAGTCAAAGATAATATCAATTTGCGTGCGGATGTTGGTATCGGTCAAAATGAAACCA
ATTTCTACTTAAACGTAAACGAAGTCTTCTAA

Upstream 100 bases:

>100_bases
ATGTCTGATAATGCTCTTGCTCTTATAGAAGCGAAGCGCTCTAGTATCTAGTTAGCGCAGCGTATAGCCCCACACCACAA
CTCATAACAGAATGACTTAA

Downstream 100 bases:

>100_bases
TGGGGTTCCGTCTTATTTGCCTTACTTTAGCGATGAGCGCCAGTGTTCAATCTGTCATGGCAAACGAGCAAGTTCGAGAG
GCATCGTGCTCTGTCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGADGGFDESKVIDMSYLPTAYYTPEKKFGVGLLMVGLY
KTENAAVEEQPSSLVVNSFVSMNKSYGVSVENMSFFNQGKQRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSF
KPRWMTEVANNYFIGIGADLTYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDYRLNAKKGWLLQFDAGLYH
NDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAPWNIMPDLGGSSAMRGYIKGRYRDDQMMMGQVEYRLPIFQ
RYGMVFWGAVGSVAPSVSELSDELMTSYGTGFRFKVKDNINLRADVGIGQNETNFYLNVNEVF

Sequences:

>Translated_383_residues
MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGADGGFDESKVIDMSYLPTAYYTPEKKFGVGLLMVGLY
KTENAAVEEQPSSLVVNSFVSMNKSYGVSVENMSFFNQGKQRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSF
KPRWMTEVANNYFIGIGADLTYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDYRLNAKKGWLLQFDAGLYH
NDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAPWNIMPDLGGSSAMRGYIKGRYRDDQMMMGQVEYRLPIFQ
RYGMVFWGAVGSVAPSVSELSDELMTSYGTGFRFKVKDNINLRADVGIGQNETNFYLNVNEVF
>Mature_383_residues
MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGADGGFDESKVIDMSYLPTAYYTPEKKFGVGLLMVGLY
KTENAAVEEQPSSLVVNSFVSMNKSYGVSVENMSFFNQGKQRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSF
KPRWMTEVANNYFIGIGADLTYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDYRLNAKKGWLLQFDAGLYH
NDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAPWNIMPDLGGSSAMRGYIKGRYRDDQMMMGQVEYRLPIFQ
RYGMVFWGAVGSVAPSVSELSDELMTSYGTGFRFKVKDNINLRADVGIGQNETNFYLNVNEVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43247; Mature: 43247

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGADGGFDESKVIDMSYLP
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECC
TAYYTPEKKFGVGLLMVGLYKTENAAVEEQPSSLVVNSFVSMNKSYGVSVENMSFFNQGK
CEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCHHHHCCC
QRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSFKPRWMTEVANNYFIGIGADL
EEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEECCCE
TYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDYRLNAKKGWLLQFDAGLYH
EEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCEE
NDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAPWNIMPDLGGSSAMRGYIKG
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCEECCCCCCCHHHHHHHCC
RYRDDQMMMGQVEYRLPIFQRYGMVFWGAVGSVAPSVSELSDELMTSYGTGFRFKVKDNI
EECCCHHEECEEEECCHHHHHCCEEEEECHHHCCCCHHHHHHHHHHHHCCCEEEEEECCC
NLRADVGIGQNETNFYLNVNEVF
EEEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGADGGFDESKVIDMSYLP
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECC
TAYYTPEKKFGVGLLMVGLYKTENAAVEEQPSSLVVNSFVSMNKSYGVSVENMSFFNQGK
CEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCHHHHCCC
QRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSFKPRWMTEVANNYFIGIGADL
EEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEECCCE
TYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDYRLNAKKGWLLQFDAGLYH
EEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECCCCEE
NDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAPWNIMPDLGGSSAMRGYIKG
CCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCEECCCCCCCHHHHHHHCC
RYRDDQMMMGQVEYRLPIFQRYGMVFWGAVGSVAPSVSELSDELMTSYGTGFRFKVKDNI
EECCCHHEECEEEECCHHHHHCCEEEEECHHHCCCCHHHHHHHHHHHHCCCEEEEEECCC
NLRADVGIGQNETNFYLNVNEVF
EEEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA