| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209693842
Identifier: 209693842
GI number: 209693842
Start: 277381
End: 278025
Strand: Direct
Name: 209693842
Synonym: VSAL_I0230
Alternate gene names: NA
Gene position: 277381-278025 (Clockwise)
Preceding gene: 209693841
Following gene: 209693843
Centisome position: 8.34
GC content: 41.4
Gene sequence:
>645_bases ATGATGCAATTCTGCCCTTTGTGTCAGCATTCGCAGGCTGATAACTTCCACCAAGATAAGCATCGACGTTATTATCGTTG TCAGCAATGTTATCTTATTTATGTGGATGAGGCAGATCGTTTCGACGCTGAAGCTGAAAAAGCTCACTACGATTGTCATG AAAATAATCTTGACGATGAAGGGTATAAAACCTTCTTATCACGATTTTCTGAGCCCTTGTTGCAACGTGTTGGTAAGACA CCTCAACAAGGTCTAGACTTTGGATGTGGCCCTGGACCATTGCTTGCTCATATGATGAGAGAAGCGGGTCACCATATCGA ACTCTATGATATTTATTACACACCAGATAAGTCCGTGCTTACTAAGCAGTACGACTTCGTCAGTTGTACAGAAGCTATTG AGCATTTTTATCAACCTCAAAACGAATTGGAATTGTTATTGAGCTTGATAAAACCTGGTGGTTGGTTAGGTATCATGACG AAACTAGCCAGGGACGAAAGCGCGTTTGCCACTTGGCATTACAAGAGTGATTTAACCCATGTCAGCTTTTTCAGCAAAGA CACATTTGAGTTTGTAGCAAAGCGCTATCAACTTGATATGGAGTTTGTTGGAGAGGATGTCATTTTACTGAGGAAAACCC AGTAA
Upstream 100 bases:
>100_bases TAGCTGCTTTTTTTATGAAAAATACATGAAAAACGATTATCTTTGCACCAGTATCGGGTATACTTCCCGCCCTAGAATTT TCAGGGAGTAGAGTGAGTTT
Downstream 100 bases:
>100_bases TGAGCCGTACTAAAAAAGCCCGTACTCCGGGAATGGCGAGTGAGCCAGTAGTTGTAACACGTAACCGTACCGATCGTGAC GTAGACAGTCGTGAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase-Related Protein; Methyltransferase Domain-Containing Protein; Methyltransferase; Methyltransferase-Like Protein; Methyltransferase/Methylase; Thymidylate Kinase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEAEKAHYDCHENNLDDEGYKTFLSRFSEPLLQRVGKT PQQGLDFGCGPGPLLAHMMREAGHHIELYDIYYTPDKSVLTKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMT KLARDESAFATWHYKSDLTHVSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ
Sequences:
>Translated_214_residues MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEAEKAHYDCHENNLDDEGYKTFLSRFSEPLLQRVGKT PQQGLDFGCGPGPLLAHMMREAGHHIELYDIYYTPDKSVLTKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMT KLARDESAFATWHYKSDLTHVSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ >Mature_214_residues MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEAEKAHYDCHENNLDDEGYKTFLSRFSEPLLQRVGKT PQQGLDFGCGPGPLLAHMMREAGHHIELYDIYYTPDKSVLTKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMT KLARDESAFATWHYKSDLTHVSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25177; Mature: 25177
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEAEKAHYDCHENNLDDE CCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHH GYKTFLSRFSEPLLQRVGKTPQQGLDFGCGPGPLLAHMMREAGHHIELYDIYYTPDKSVL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHH TKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMTKLARDESAFATWHYKSDLTH HHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEECCCCCC VSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ HHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEAEKAHYDCHENNLDDE CCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCHH GYKTFLSRFSEPLLQRVGKTPQQGLDFGCGPGPLLAHMMREAGHHIELYDIYYTPDKSVL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHH TKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMTKLARDESAFATWHYKSDLTH HHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEECCCCCC VSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ HHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA