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The map label for this gene is 209693841

Identifier: 209693841

GI number: 209693841

Start: 276622

End: 277239

Strand: Direct

Name: 209693841

Synonym: VSAL_I0229

Alternate gene names: NA

Gene position: 276622-277239 (Clockwise)

Preceding gene: 209693839

Following gene: 209693842

Centisome position: 8.32

GC content: 44.82

Gene sequence:

>618_bases
ATGAAAAAATTAGCGCTGATATTAACTCTCCTAGCTAGTTGCTCAACATGGGCTCAAGGAGACATCGAAGCTGGGAAGCA
AAAATCTGTAACTTGTACGGCTTGTCATGGTCAAGAGGGCAACAGTACTCTGACTCAATACCCGAACTTAGCTGGTCAAC
ACGCAGGTTATCTTGAAAAGCAGATCAATGAATTTAAATTAGGGATGCAAACCCAAGGAAAACAAGGCCGTATGGACCCT
GTTATGGGAGCAATGGCGATGGCGGTTAGTGAAGAAGATGCAAAAGACATTGCAGCGTATTACGCCTCTTTACCAATGGC
TGATAACACAACGCCTGAAGACTCGATTCCTGCCGGTAAAGCATTATATTTAGCGGGTGATATGGAACGTGGTATTACGG
CTTGTGTTGCTTGTCATGGACCGCGTGGTAACGGAACCTCACTGTCAGGTTTTCCTAAGATATCAGGACAACATTCTGAC
TACGTGAAAGCGCAGTTAGAGAAGTTTCGCTCTGCTGATCGTGCAAACGATATGAATGGTATGATGCGTGATATCGCCAA
AAAGCTTACTGACGACGACATTGCGACACTTTCGCAATATGTTGGTGGCTTGCATTAA

Upstream 100 bases:

>100_bases
TTAGAGCGGTACTGGAAGCTTAATATTCAACACAATGCGAAGAAACCTTGTTAAAAAGGGTAACTCATTGTGAGGGAACG
ATAATAATAAATGGAATGTC

Downstream 100 bases:

>100_bases
TTTCTAATGCAGCAGTAACGAATTTAAAGAAGCAGCTCTTGTAGCTGCTTTTTTTATGAAAAATACATGAAAAACGATTA
TCTTTGCACCAGTATCGGGT

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLTQYPNLAGQHAGYLEKQINEFKLGMQTQGKQGRMDP
VMGAMAMAVSEEDAKDIAAYYASLPMADNTTPEDSIPAGKALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSD
YVKAQLEKFRSADRANDMNGMMRDIAKKLTDDDIATLSQYVGGLH

Sequences:

>Translated_205_residues
MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLTQYPNLAGQHAGYLEKQINEFKLGMQTQGKQGRMDP
VMGAMAMAVSEEDAKDIAAYYASLPMADNTTPEDSIPAGKALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSD
YVKAQLEKFRSADRANDMNGMMRDIAKKLTDDDIATLSQYVGGLH
>Mature_205_residues
MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLTQYPNLAGQHAGYLEKQINEFKLGMQTQGKQGRMDP
VMGAMAMAVSEEDAKDIAAYYASLPMADNTTPEDSIPAGKALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSD
YVKAQLEKFRSADRANDMNGMMRDIAKKLTDDDIATLSQYVGGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21912; Mature: 21912

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLTQYPNLAGQHAGYLEK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHH
QINEFKLGMQTQGKQGRMDPVMGAMAMAVSEEDAKDIAAYYASLPMADNTTPEDSIPAGK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSDYVKAQLEKFRSADRANDMNG
EEEEECCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
MMRDIAKKLTDDDIATLSQYVGGLH
HHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLTQYPNLAGQHAGYLEK
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHH
QINEFKLGMQTQGKQGRMDPVMGAMAMAVSEEDAKDIAAYYASLPMADNTTPEDSIPAGK
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSDYVKAQLEKFRSADRANDMNG
EEEEECCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
MMRDIAKKLTDDDIATLSQYVGGLH
HHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA