Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is fecB [C]

Identifier: 209693760

GI number: 209693760

Start: 177570

End: 178520

Strand: Direct

Name: fecB [C]

Synonym: VSAL_I0138

Alternate gene names: 209693760

Gene position: 177570-178520 (Clockwise)

Preceding gene: 209693759

Following gene: 209693761

Centisome position: 5.34

GC content: 43.32

Gene sequence:

>951_bases
ATGAGTAGCCACACTGCTGCTATTCCCTTAAACCAAATAAGCAGCTCCCCATTCCCTGTCACCATTAAAACCGCGCATGG
AACCGCGGTTATTCCTACTCACCCGCAACGCGTCATCACTCTAGGCGCAACAACCGAAGATTGGTGCTTGCTCTTAGGCA
TTGTGCCTATCGCCATTGAAGCTCATTATTGGGGTGGTGACAGCAAAGGTTATCTACCTTGGTTTAAACAAGCCGTCCTA
GAACAAGAAAAAGCCTTACCCTCAGTACTCAATAGCTACCCTGAACTCGATATCGAGCATATTTTATCATTAAAACCCGA
CCTAATTTTAGCGCCACAATCTGGGATCACACTCGAAACGTTTAACCAATTAAACAGTTTTGTTCCTGTTGTTGCTTATC
CAGATCAACCTTGGCTTACCCCTATCGATAAGCAAGTTACCCTCATTTCAACGGCTTTAGGAAAAACAGAAGAAGGAGAG
GCCCTGCTTGTTCAATTACACCAATACCTTGCTTCACTTGCCGATGCAAACCCTCAATTTAAAGGTAAAAAACTGGCGTA
TATTAATGCAGGAAGTCGATTCGGTAATCTTGCGTTGTATGTACCTGGCGATCCACGTATCGATTCTCTACTCGCACTCG
GCTTTATACAACTTCCTGAAGTCAAAGACATAAAACCAACTCGTGGACATTTCACGGCCAACATTGGTTTAGAGCACTCC
GATATATTTAATGATGCCGATCTCATTATTAGTTGGTATGAGTCTGAAAAAAGCAAACAAGCCGTTGAAAAAATCCCGCT
TTTCTCACACATCAACGCCGTTAAGCAAGGACGATATCTTGCGATAACCGATCCCTCAATTGTAATGGCGACGTCCTATG
GCAGTTTACTCAGTTTGGAATGGGTAATGCCCGCATTTATTCCAAAAATCAAAGAGGTTATGGGTAAATGA

Upstream 100 bases:

>100_bases
ATTTATCTCAAATTTACTTGGAGGCCCCTACCGTAAGGTAGGGCGACATTTTATAACTATATTAAAATGGCCAAAAGCAA
TCTCTCTGCTGTTTATATTC

Downstream 100 bases:

>100_bases
ATAACGCAGATAACCAATTAACTAGTACACCTGACTTGGCTATTCTCCCTTCTTTAATCAGCAGAAATAAAAAGGTCACT
ACCACATTAATATTGCTAAT

Product: iron-siderophore ABC transporter periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Transport System Permease Protein; ABC-Type Fe3+-Siderophores Transport System; ABC-Transport System; ABC-Type Fe3+-Hydroxamate Transport System; Periplasmic Iron-Transport Lipoprotein; Periplasmic IRON-Transport Lipoprotein; Iron ABC Transporter Permease; Lipoprotein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATTEDWCLLLGIVPIAIEAHYWGGDSKGYLPWFKQAVL
EQEKALPSVLNSYPELDIEHILSLKPDLILAPQSGITLETFNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGE
ALLVQLHQYLASLADANPQFKGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVKDIKPTRGHFTANIGLEHS
DIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLAITDPSIVMATSYGSLLSLEWVMPAFIPKIKEVMGK

Sequences:

>Translated_316_residues
MSSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATTEDWCLLLGIVPIAIEAHYWGGDSKGYLPWFKQAVL
EQEKALPSVLNSYPELDIEHILSLKPDLILAPQSGITLETFNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGE
ALLVQLHQYLASLADANPQFKGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVKDIKPTRGHFTANIGLEHS
DIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLAITDPSIVMATSYGSLLSLEWVMPAFIPKIKEVMGK
>Mature_315_residues
SSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATTEDWCLLLGIVPIAIEAHYWGGDSKGYLPWFKQAVLE
QEKALPSVLNSYPELDIEHILSLKPDLILAPQSGITLETFNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGEA
LLVQLHQYLASLADANPQFKGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVKDIKPTRGHFTANIGLEHSD
IFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLAITDPSIVMATSYGSLLSLEWVMPAFIPKIKEVMGK

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34702; Mature: 34571

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50042 CNMP_BINDING_3 ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATTEDWCLLLGIVPIAIE
CCCCCEEEEHHHHCCCCCCEEEEECCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHEEE
AHYWGGDSKGYLPWFKQAVLEQEKALPSVLNSYPELDIEHILSLKPDLILAPQSGITLET
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCHHH
FNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGEALLVQLHQYLASLADANPQF
HHHHHCCCCEEEECCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
KGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVKDIKPTRGHFTANIGLEHS
CCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCEECCCCCCCCCCCCCEEEECCCCHH
DIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLAITDPSIVMATSYGSLLSLE
HCCCCHHEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEHH
WVMPAFIPKIKEVMGK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATTEDWCLLLGIVPIAIE
CCCCEEEEHHHHCCCCCCEEEEECCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHEEE
AHYWGGDSKGYLPWFKQAVLEQEKALPSVLNSYPELDIEHILSLKPDLILAPQSGITLET
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCHHH
FNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGEALLVQLHQYLASLADANPQF
HHHHHCCCCEEEECCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
KGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVKDIKPTRGHFTANIGLEHS
CCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHCEECCCCCCCCCCCCCEEEECCCCHH
DIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLAITDPSIVMATSYGSLLSLE
HCCCCHHEEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEHH
WVMPAFIPKIKEVMGK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA