Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is fpvA [H]

Identifier: 209693759

GI number: 209693759

Start: 175286

End: 177451

Strand: Direct

Name: fpvA [H]

Synonym: VSAL_I0137

Alternate gene names: 209693759

Gene position: 175286-177451 (Clockwise)

Preceding gene: 209693758

Following gene: 209693760

Centisome position: 5.27

GC content: 40.58

Gene sequence:

>2166_bases
ATGACATTGAATACGAACATGACATCACCAAAAATACCGACATACTCACTTTTCTATGGGTTATCTTGTGTTTTAACGTT
GCCAGTAATGGCAGAGGACAATGATAACGAGGCAATGGAAGTAATGACCATTACCGCGCATAAACAAGAGATTGCCAGCT
ATAAAACAGGTGAAACCTCAACCTCAACAGGGATGGATTTATCCTATTTAGAAACACCACAATCTGTAACTGCCGTGAAC
GAACAAGCCATGAAAGATCAACAACTAAACAGTGTTGTTGATGTAATGAACAGCGTATCGAGTGTTTACGCTCGACCTAT
GGACAACGACAGATACACCGTCTCTGCTCGTGGTATGGAAGTAAGCACCATTCTTTATGATGGCGTTCCTATCACCTATG
ACACCCGTTTCAATTACGGTGATAACCTAATGGATACGGCGATTTATGATCGCGTTGAAGTGGTTCGCGGTGCGAACGGA
TTAATGATTGGTGCAGGCGAGCCTTCAGCCTCTATCAACCTTATTAGAAAACGTCCTACTCACGATTTTAATGCCAATGT
TAGCGTAGGCACGGGATCTTGGAATTTAAAACGTGGGGTCGTTGATATCTCTGGCAGCGTAAATACTGATGAAAGTATTA
GAGCTCGTCTTGTTGCTGTCCATCAAGAACGTGACTCCTACTTAGACAGATACGAACAGAAAAGAAGTACATTATATGGC
GTTATTGAGGCCGATTTAACCACCGACACCTTATTAACGGTCGGTACCGATTATCAATATAACGAGCCAAAAGGCACCAT
GGCGGGAGGACTTCCCCTCTTTCATAGCGATGGTACGAGAACAAATTACAGCACATCAGCAACCACCGCTCCTGACTGGG
CATCCGCTGAAACCACAGCATTAAATTCATTTGTCAGTCTAGAGCATAGCTTTAACCCAGATTGGGTAATAAAAGGAACG
TATACCTATGGTGATAACAGCTTAGATTTCAATTATTTATGGCCGAAAGGTTTTCCTGACCCAAATACAAATGAAGGTAT
GGTTCCAGGCAGTATTAATTATATTGATGGAAATCGAAAAATTAATAATCTTAACCTAACTCTCAAAGGTCATTTTTCTC
TGTTTGGACAAGATCACCAAATGATCGCGGGTTTCAACAATCAAAAAATGACGTTCGAGAATACTTACTATAAAGGGCTA
AACGCACAATCAGAGGTCGGTGATTTTACTGACCCAAATTGGTCTTATCCAGAACCGGAATGGAGCAGAGAAAAAAGCTG
GGAATCAACAGGAGAAACCAAACAACAAGGGATCTATGTCGCCTCACATATCAATGTAACTGACCAGTGGTCTTTCGTTC
TTGGTGGACGATTGAGTGACTGGGAAACCGATATGAATGACTTTGGAACCCTTCATAAAAATAAAATCAGTAATGAATTT
ACCTCATACGTTGGGACGACTTATGCAATAACCCCCATTGTTGCGGTATACGCCAGTTACTCTGATATTTTCACACCGCA
AAACGTAAAAGGTAAAAATAATACGTATCTCGACCCGATTAAAGGAAAGAACTATGAAACAGGAATTAAAGCAAGCCTCT
TGGATGATCAGTTAAACCTTTCTCTTAATGGCTTCAACACGTTACAGGATAATTTAGGAATAAAAACTGGCGACGTCGAT
CCAAATACAGGGATGCCTATTTATCGTGGTGTTGATGGTACAGAAACCAAAGGGTTCGAGTTTGAAACCAATGGTGCCAT
CACAGATGACTGGAACTTAACGCTTGGCTATACCTATTTCAAAATAGAAGATCCACAAGGAAATAGATTAAAAACAGACA
TCCCTAACAAACAACTCAAACTCTTCACCACTTATGAATTAGGTGACGTTTTAGAGGGCCTCCAAATTGGCGGAGGGGCT
CGTTGGTACAGCAGTATTTATAAAGAAGTAAGCGGTATACCTAATGTTGGAGATACCAAAGTAAAACAAGACAGTTACGC
GATATACGATGTAATGGTGCGATATGAGGTAAACAAAAAACTTAACGTCAATGCAAATGTTAAAAACCTTTTTGATAAAG
AATATTACAGCCAGATGGGGATCTATAACCAATATCACGCTGGCGAGCCTCGTAATATAAGCGTGAATGTTGACTACCAA
TTTTAA

Upstream 100 bases:

>100_bases
GAGAAAAGAACTTACGTTTTGCTGAGGATATTGCAAACCCTCTCGCTCTATTTGCTAAGACTCATCGCATTATTTAGTTC
ACTGACTTTTAGGCCAAACA

Downstream 100 bases:

>100_bases
GACCAACGCTGTTCATTCATTTATCTCAAATTTACTTGGAGGCCCCTACCGTAAGGTAGGGCGACATTTTATAACTATAT
TAAAATGGCCAAAAGCAATC

Product: TonB-dependent iron-siderophore receptor precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 721; Mature: 720

Protein sequence:

>721_residues
MTLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTITAHKQEIASYKTGETSTSTGMDLSYLETPQSVTAVN
EQAMKDQQLNSVVDVMNSVSSVYARPMDNDRYTVSARGMEVSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANG
LMIGAGEPSASINLIRKRPTHDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQERDSYLDRYEQKRSTLYG
VIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRTNYSTSATTAPDWASAETTALNSFVSLEHSFNPDWVIKGT
YTYGDNSLDFNYLWPKGFPDPNTNEGMVPGSINYIDGNRKINNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKGL
NAQSEVGDFTDPNWSYPEPEWSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRLSDWETDMNDFGTLHKNKISNEF
TSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYLDPIKGKNYETGIKASLLDDQLNLSLNGFNTLQDNLGIKTGDVD
PNTGMPIYRGVDGTETKGFEFETNGAITDDWNLTLGYTYFKIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQIGGGA
RWYSSIYKEVSGIPNVGDTKVKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKEYYSQMGIYNQYHAGEPRNISVNVDYQ
F

Sequences:

>Translated_721_residues
MTLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTITAHKQEIASYKTGETSTSTGMDLSYLETPQSVTAVN
EQAMKDQQLNSVVDVMNSVSSVYARPMDNDRYTVSARGMEVSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANG
LMIGAGEPSASINLIRKRPTHDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQERDSYLDRYEQKRSTLYG
VIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRTNYSTSATTAPDWASAETTALNSFVSLEHSFNPDWVIKGT
YTYGDNSLDFNYLWPKGFPDPNTNEGMVPGSINYIDGNRKINNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKGL
NAQSEVGDFTDPNWSYPEPEWSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRLSDWETDMNDFGTLHKNKISNEF
TSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYLDPIKGKNYETGIKASLLDDQLNLSLNGFNTLQDNLGIKTGDVD
PNTGMPIYRGVDGTETKGFEFETNGAITDDWNLTLGYTYFKIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQIGGGA
RWYSSIYKEVSGIPNVGDTKVKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKEYYSQMGIYNQYHAGEPRNISVNVDYQ
F
>Mature_720_residues
TLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTITAHKQEIASYKTGETSTSTGMDLSYLETPQSVTAVNE
QAMKDQQLNSVVDVMNSVSSVYARPMDNDRYTVSARGMEVSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANGL
MIGAGEPSASINLIRKRPTHDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQERDSYLDRYEQKRSTLYGV
IEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRTNYSTSATTAPDWASAETTALNSFVSLEHSFNPDWVIKGTY
TYGDNSLDFNYLWPKGFPDPNTNEGMVPGSINYIDGNRKINNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKGLN
AQSEVGDFTDPNWSYPEPEWSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRLSDWETDMNDFGTLHKNKISNEFT
SYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYLDPIKGKNYETGIKASLLDDQLNLSLNGFNTLQDNLGIKTGDVDP
NTGMPIYRGVDGTETKGFEFETNGAITDDWNLTLGYTYFKIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQIGGGAR
WYSSIYKEVSGIPNVGDTKVKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKEYYSQMGIYNQYHAGEPRNISVNVDYQF

Specific function: Receptor for the siderophore ferripyoverdine [H]

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=726, Percent_Identity=34.435261707989, Blast_Score=416, Evalue=1e-117,
Organism=Escherichia coli, GI1786344, Length=754, Percent_Identity=23.7400530503979, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787024, Length=788, Percent_Identity=23.4771573604061, Blast_Score=114, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 80618; Mature: 80487

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTITAHKQEIASYKTGETS
CEECCCCCCCCCCCHHHHHHCEEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHCCCCCCC
TSTGMDLSYLETPQSVTAVNEQAMKDQQLNSVVDVMNSVSSVYARPMDNDRYTVSARGME
CCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEE
VSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANGLMIGAGEPSASINLIRKRPT
EEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCC
HDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQERDSYLDRYEQKRSTLYG
CCCCCEEEEECCCCEEECCEEEECCCCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHEEE
VIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRTNYSTSATTAPDWASAETTA
EEEECCCCCEEEEECCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LNSFVSLEHSFNPDWVIKGTYTYGDNSLDFNYLWPKGFPDPNTNEGMVPGSINYIDGNRK
HHHHEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCE
INNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKGLNAQSEVGDFTDPNWSYPEPE
EEEEEEEEEEEEEEECCCCEEEECCCCCEEEECCCEECCCCCHHHCCCCCCCCCCCCCCC
WSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRLSDWETDMNDFGTLHKNKISNEF
CCCCCCCCCCCCHHHCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHH
TSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYLDPIKGKNYETGIKASLLDDQLNL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEE
SLNGFNTLQDNLGIKTGDVDPNTGMPIYRGVDGTETKGFEFETNGAITDDWNLTLGYTYF
EECCCCHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCEECCCCEEEEEEEE
KIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQIGGGARWYSSIYKEVSGIPNVGDTK
EEECCCCCEEECCCCCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
VKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKEYYSQMGIYNQYHAGEPRNISVNVDYQ
CCCCCEEEEEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
F
C
>Mature Secondary Structure 
TLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTITAHKQEIASYKTGETS
EECCCCCCCCCCCHHHHHHCEEEEEEEEEECCCCCCEEEEEEEEHHHHHHHHCCCCCCC
TSTGMDLSYLETPQSVTAVNEQAMKDQQLNSVVDVMNSVSSVYARPMDNDRYTVSARGME
CCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEE
VSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANGLMIGAGEPSASINLIRKRPT
EEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCC
HDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQERDSYLDRYEQKRSTLYG
CCCCCEEEEECCCCEEECCEEEECCCCCCCHHHHEEEEEEHHHHHHHHHHHHHHHHHEEE
VIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRTNYSTSATTAPDWASAETTA
EEEECCCCCEEEEECCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
LNSFVSLEHSFNPDWVIKGTYTYGDNSLDFNYLWPKGFPDPNTNEGMVPGSINYIDGNRK
HHHHEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCE
INNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKGLNAQSEVGDFTDPNWSYPEPE
EEEEEEEEEEEEEEECCCCEEEECCCCCEEEECCCEECCCCCHHHCCCCCCCCCCCCCCC
WSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRLSDWETDMNDFGTLHKNKISNEF
CCCCCCCCCCCCHHHCCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCHHHHHHHHHH
TSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYLDPIKGKNYETGIKASLLDDQLNL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCEEE
SLNGFNTLQDNLGIKTGDVDPNTGMPIYRGVDGTETKGFEFETNGAITDDWNLTLGYTYF
EECCCCHHHHCCCEEECCCCCCCCCCEEECCCCCCCCCEEEECCCCEECCCCEEEEEEEE
KIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQIGGGARWYSSIYKEVSGIPNVGDTK
EEECCCCCEEECCCCCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
VKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKEYYSQMGIYNQYHAGEPRNISVNVDYQ
CCCCCEEEEEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8335619; 8918232; 10984043 [H]