Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693666

Identifier: 209693666

GI number: 209693666

Start: 35944

End: 36303

Strand: Reverse

Name: 209693666

Synonym: VSAL_I0033

Alternate gene names: NA

Gene position: 36303-35944 (Counterclockwise)

Preceding gene: 209693667

Following gene: 209693662

Centisome position: 1.09

GC content: 32.22

Gene sequence:

>360_bases
ATGGATAAGTTATTTAAAGTAGTAAGCAATGGAATTTATGAAATTGTAGATAACGCATGTAATCACAATACAATAGCAAC
ACCTTTAAGTCAGAAGGCATTTTCCCCCCTCGCTTACATGAGTGAAATGATGGTACCAAATGATATGCCAATGAAAATGC
ATGATTTCGCAGCTCGATGTATTAACTTAATAGGATTGAGTTGCCAAATAATGAATACTCACCAATCTAATTTCAAAACC
ACAGATACATACTTAATATGTAAATCATTTATCTCTAATGTTTGCGATGAATTAGAAATGCCTAGTAATTCCTACCAAAG
ACAGTACTGGCTAGAGCAAATTGATAACAAATTACTTTAA

Upstream 100 bases:

>100_bases
AAGCATGTTAGAAATAGACTAAAAATGGTTCTAATTTAGCAACCTTTCTGATTATCTGAGATCGAGCATTATTTAAACAA
CCAATTATAGAGAAAATACG

Downstream 100 bases:

>100_bases
TATCAATTTATAATAAAGTTAGATGTAATTTCTTCTCGATAGTGACATTAGGGTATGCTTAGTTTTCGTGATATTTGAAT
TAAAATGTTGATCACGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMVPNDMPMKMHDFAARCINLIGLSCQIMNTHQSNFKT
TDTYLICKSFISNVCDELEMPSNSYQRQYWLEQIDNKLL

Sequences:

>Translated_119_residues
MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMVPNDMPMKMHDFAARCINLIGLSCQIMNTHQSNFKT
TDTYLICKSFISNVCDELEMPSNSYQRQYWLEQIDNKLL
>Mature_119_residues
MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMVPNDMPMKMHDFAARCINLIGLSCQIMNTHQSNFKT
TDTYLICKSFISNVCDELEMPSNSYQRQYWLEQIDNKLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13698; Mature: 13698

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMVPNDMPMKMHDFAARC
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHH
INLIGLSCQIMNTHQSNFKTTDTYLICKSFISNVCDELEMPSNSYQRQYWLEQIDNKLL
HHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMVPNDMPMKMHDFAARC
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHH
INLIGLSCQIMNTHQSNFKTTDTYLICKSFISNVCDELEMPSNSYQRQYWLEQIDNKLL
HHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA