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The map label for this gene is yhgA [C]

Identifier: 209693662

GI number: 209693662

Start: 30807

End: 31769

Strand: Reverse

Name: yhgA [C]

Synonym: VSAL_I0029

Alternate gene names: 209693662

Gene position: 31769-30807 (Counterclockwise)

Preceding gene: 209693666

Following gene: 209693655

Centisome position: 0.96

GC content: 40.81

Gene sequence:

>963_bases
ATGAGTAAGAAAAACACAACAACACCCCATGATGGGTTGTTTAAAGCCTTTTTAACAACGCCTGATACCGCTAAAGATAT
GTTGGAAATACACTTACCAACGCATCTTAAAACGTTATGCGACCTATCAACATTGAAACTGGAATCAGGTTCGTTTTTAG
AAGACGACTTACGTCCGTATTATTCAGACGTGCTCTACTCAATGAAGACAGAATGTGGTGACGGCTATATTTATGCTCTT
ATTGAGCACCAAAGTAGCCCTGACGAGCACATGGCCTTTCGTATGTTCAGATATGCTATTGCAGCCATGCAAAAGCATCT
TGACGCTGGAAACAAAGATCTGCCATTAGTTGTTCCTCTGCTGTTTTACCACGGTAAAACATCACCATATCCATACAGCA
TGAATTGGTTAGATTGTTTTACTAAACCAGAAATGGCGAAAGCTCTCTATAACAATGATTTTCCATTAGTGGATGTCACT
GTTATGGATGACAGCGAGATAATGCAGCACAAGCGCATTGCACTATTAGAGCTAGTCCAGAAACACATTTACCAAAAAGA
CATCAATGATATTCTTGAATCGTTAGCCATCTTATTATTAAATGACTACCACACAGACAGCCAAGTCCGAACCCTGATTG
AATACTTAGTAACGGTAGGGGAAACTCAGAACGTGAATACGTTATTGGAAGAGTTGGCACAGCAAGTACCAAAACACGAG
GGCACACTAATGACAATAGCAGAGCAACTAATTTTGCAAGGCGAGCAAAAAGGTCTTCAACAGGGACTTCAACAAGGTCG
TCAAGAAGGCGAACAAAAAGGCCGTCAAGAAGGCCGTCAAGAAGGCCGTCAAGATACATTGAAAGAAATGGCTCGTAACT
TACTTCTCTCAGGCGTTGATAAAGATGCAATCATGAAAGCGACTGGATTTAGCTCTCGTGAATTAGAACTTATTTCTCAT
TAG

Upstream 100 bases:

>100_bases
ATCACGTCATAATCTCCATTTTAACCACTCTCAGAGACTAAATTATTTTCCATTCGATTAGTGGTATACTTAACTTAATC
AGTAGAGTGGATCACTTTTC

Downstream 100 bases:

>100_bases
CACATTACGTCATAATGTAATGCATATTTTGGGGATATGTAGATGTAGAATTAAAGGGCGAACGGTGTTCGCTCTTTTTT
TGTGATTTAGAAAGCAGGTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYAL
IEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKDLPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVT
VMDDSEIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNTLLEELAQQVPKHE
GTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQEGRQDTLKEMARNLLLSGVDKDAIMKATGFSSRELELISH

Sequences:

>Translated_320_residues
MSKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYAL
IEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKDLPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVT
VMDDSEIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNTLLEELAQQVPKHE
GTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQEGRQDTLKEMARNLLLSGVDKDAIMKATGFSSRELELISH
>Mature_319_residues
SKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTLKLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALI
EHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKDLPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTV
MDDSEIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNTLLEELAQQVPKHEG
TLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQEGRQDTLKEMARNLLLSGVDKDAIMKATGFSSRELELISH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=319, Percent_Identity=52.3510971786834, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1788643, Length=320, Percent_Identity=46.875, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1788577, Length=315, Percent_Identity=48.2539682539683, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1786324, Length=298, Percent_Identity=48.993288590604, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 36482; Mature: 36351

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTLKLESGSFLEDDLRPY
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHHH
YSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKDLPLVVPL
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMDDSEIMQHKRIALLELVQ
HHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNTLLEELAQQVPKHE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQEGRQDTLKEMARNLLLSGVD
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDAIMKATGFSSRELELISH
HHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
SKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTLKLESGSFLEDDLRPY
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHHH
YSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKDLPLVVPL
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMDDSEIMQHKRIALLELVQ
HHHCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGETQNVNTLLEELAQQVPKHE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQEGRQDTLKEMARNLLLSGVD
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KDAIMKATGFSSRELELISH
HHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]