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The map label for this gene is yibQ [H]

Identifier: 203284663

GI number: 203284663

Start: 826845

End: 827768

Strand: Reverse

Name: yibQ [H]

Synonym: BDU_774

Alternate gene names: 203284663

Gene position: 827768-826845 (Counterclockwise)

Preceding gene: 203284664

Following gene: 203284662

Centisome position: 88.85

GC content: 23.27

Gene sequence:

>924_bases
ATGAATATTCAAAATATTTATGTTTTTATTAAAAGACATAAGTTACAAATTAAAGTATTGTTTATCATAATTACATCTTT
TGCATCAATAAGTATATTGTTTTCTAGTTTTGTATATCTAAAATCCAATAACAATAAAATTAATTTAAAGTTAAAAGATA
AATTGGCAAAACTTAAAAGACACAATTTAACAAAAACAAAACAAAAATTAAAACTCAACAATTCAAAGCCAGAATTTTAT
CTTATAATTGATGACGTTGGATACGATGAATTTATGTTAGACGAATTTATAAAAATTAATCTAAACATTAATTTTTCAAT
TATTCCCTTTTTACCAAAATCAATGGAATTTTATAACAAACTACAAAATAAAAACAAAATTATAATGATTCATTTCCCAA
TGCAATCAAAACATAAAAATTCAATAGAAAAATTTCATATCAATATCAATGATGATGAAATCACTATAAGAACAAAAATT
GAAACAACATTCAATACATATCCAAATGCAAAGATAATGAATAATCATATGGGAAGTCTTATTACCTCAAATGAAAACAT
TATGAAAATCATGTTAATAAAACTTAAAGAAAAAAATAAATATTTCTTTGACAGTCTAACTACTAAAGACAGCATATCTA
TACAAACTGGTAAAAGCATTGGAATCTTGGTAGAACAAAGAGATATATTCCTTGATAATAGAGATAATGAAAAATCTGTA
ATTAAAGCACTTGAACGAGCAAAACAAATAGCTAGAACAAAAGGAATTGTCAAAGTAATAGGACACATTTGGTCAAAAAA
CACCCTTAAAATACTTCAACAAGAATCAGAAAACTTAAAGAAAGAATTTGTATTTAAAAATTTAATAAACCTTTATCAAA
GAGAGGAAAACAATGAAGGTACTTGGAATAGAAAGCTCATGTGA

Upstream 100 bases:

>100_bases
AAGACAGATCGAAAAAAGAGTACTAAAAAAACTCAGAGAAGAACTTTATCAATAAATATTGACTTAGTCACATATTTAAA
TATAATAAGAATTTCTGAGA

Downstream 100 bases:

>100_bases
TGATTGTTGTGCAGCTATAGTAGAAAATGGCAACACAATTTTAAGCAATATCAAACTTAGTCAAAAAGAACATAAAAAAT
ATTATGGAATAGTACCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNIQNIYVFIKRHKLQIKVLFIIITSFASISILFSSFVYLKSNNNKINLKLKDKLAKLKRHNLTKTKQKLKLNNSKPEFY
LIIDDVGYDEFMLDEFIKINLNINFSIIPFLPKSMEFYNKLQNKNKIIMIHFPMQSKHKNSIEKFHININDDEITIRTKI
ETTFNTYPNAKIMNNHMGSLITSNENIMKIMLIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSV
IKALERAKQIARTKGIVKVIGHIWSKNTLKILQQESENLKKEFVFKNLINLYQREENNEGTWNRKLM

Sequences:

>Translated_307_residues
MNIQNIYVFIKRHKLQIKVLFIIITSFASISILFSSFVYLKSNNNKINLKLKDKLAKLKRHNLTKTKQKLKLNNSKPEFY
LIIDDVGYDEFMLDEFIKINLNINFSIIPFLPKSMEFYNKLQNKNKIIMIHFPMQSKHKNSIEKFHININDDEITIRTKI
ETTFNTYPNAKIMNNHMGSLITSNENIMKIMLIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSV
IKALERAKQIARTKGIVKVIGHIWSKNTLKILQQESENLKKEFVFKNLINLYQREENNEGTWNRKLM
>Mature_307_residues
MNIQNIYVFIKRHKLQIKVLFIIITSFASISILFSSFVYLKSNNNKINLKLKDKLAKLKRHNLTKTKQKLKLNNSKPEFY
LIIDDVGYDEFMLDEFIKINLNINFSIIPFLPKSMEFYNKLQNKNKIIMIHFPMQSKHKNSIEKFHININDDEITIRTKI
ETTFNTYPNAKIMNNHMGSLITSNENIMKIMLIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSV
IKALERAKQIARTKGIVKVIGHIWSKNTLKILQQESENLKKEFVFKNLINLYQREENNEGTWNRKLM

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=207, Percent_Identity=30.9178743961353, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 36285; Mature: 36285

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQNIYVFIKRHKLQIKVLFIIITSFASISILFSSFVYLKSNNNKINLKLKDKLAKLKR
CCCCEEEEEEEECEEEEEEEEEHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHHHHHH
HNLTKTKQKLKLNNSKPEFYLIIDDVGYDEFMLDEFIKINLNINFSIIPFLPKSMEFYNK
CCCHHHHHHHEECCCCCEEEEEEECCCCCHHHHCCEEEEEEEEEEEEECCCCHHHHHHHH
LQNKNKIIMIHFPMQSKHKNSIEKFHININDDEITIRTKIETTFNTYPNAKIMNNHMGSL
HCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCEEECCCCCCE
ITSNENIMKIMLIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSV
EECCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEEECEEEECCCCCHHHH
IKALERAKQIARTKGIVKVIGHIWSKNTLKILQQESENLKKEFVFKNLINLYQREENNEG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWNRKLM
CCCCCCC
>Mature Secondary Structure
MNIQNIYVFIKRHKLQIKVLFIIITSFASISILFSSFVYLKSNNNKINLKLKDKLAKLKR
CCCCEEEEEEEECEEEEEEEEEHHHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHHHHHH
HNLTKTKQKLKLNNSKPEFYLIIDDVGYDEFMLDEFIKINLNINFSIIPFLPKSMEFYNK
CCCHHHHHHHEECCCCCEEEEEEECCCCCHHHHCCEEEEEEEEEEEEECCCCHHHHHHHH
LQNKNKIIMIHFPMQSKHKNSIEKFHININDDEITIRTKIETTFNTYPNAKIMNNHMGSL
HCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCEEECCCCCCE
ITSNENIMKIMLIKLKEKNKYFFDSLTTKDSISIQTGKSIGILVEQRDIFLDNRDNEKSV
EECCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEEECEEEECCCCCHHHH
IKALERAKQIARTKGIVKVIGHIWSKNTLKILQQESENLKKEFVFKNLINLYQREENNEG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWNRKLM
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]