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The map label for this gene is oppC-2 [H]

Identifier: 203284641

GI number: 203284641

Start: 804724

End: 805575

Strand: Reverse

Name: oppC-2 [H]

Synonym: BDU_751

Alternate gene names: 203284641

Gene position: 805575-804724 (Counterclockwise)

Preceding gene: 203284642

Following gene: 203284636

Centisome position: 86.47

GC content: 23.47

Gene sequence:

>852_bases
ATGAATAAATTTAAAAGATCATATATTTTATTATTGAGTATTTTCATTTTATTTCTAATAATAATTCCCAATTTAATAAA
TGAAAATTCAAAATTTGCAATATATAAAAAAGACCCAAATAAAATATACATTAAGCAAACAAACAAATTGCCGCAAACAC
CAACAAATACAAATCCTTTAGGAATTGATAAAATGGGTAGAGATATATTATCAAGATTAATATTAGCAACTAGAAATTCT
ATTTTACTTGCATTTAGTTATGCAGCAATTTCTGCAATAATTGGAATTTTTATAGGAATAATAATCGGTAATTTCAAATT
CAAAACTTGTTTGATAATTTCAAAATTAATAGAATCATTACAAACAATACCATTTTTCTATGTATTAATGTTAATTCTTT
ATTATTTTTCAAAACAAAAAAACTACAACATACTAGAGGTATCATTTATACTAGCAATAGTACACGGATGGATCAAATTT
TCATTCATCACAAGAAATAACACACTACTAATTAAAAACCTTGATTATATAAAAACAAGCAAAATGATGGGTGCAAGCCA
ATATAGAATAATAATGTATCACATATTTCCCGAAATTTTTTCATCAATTTCATCAATCATTCCCCTACAAATCTCAAAAA
GCCTAACAACTTTTGAAGTAGTAAACTTTTTACAACAACAAGACAAAAGCTATTATCCAAGTCTTGGAGAACTTTTAAGA
TATATAGAAATGGGAAAAGAATATTTTTGGATATGGATAAATCCCCTAATAATATTATTAATAATAAACATTATCTTAAC
ATCAATAAATCTCAAACTAAAAAAACACACAAAATTTTTCATATCATCATAA

Upstream 100 bases:

>100_bases
GAGACTTACTATTTGTTGGAGTATTAATTATGTTAATAACAAATTTAATAACAGATATACTAACATACAATATGAATCCT
TATAAGGATATATTAGAATA

Downstream 100 bases:

>100_bases
ATTATAATCAAACAAGTCTTGGTGCAAATTTTTCTAAAAAACAATTTTTACAGTTTTGACTACGTGATGTACAAACATCT
CTTCCATGCCTATTAATAGC

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNKFKRSYILLLSIFILFLIIIPNLINENSKFAIYKKDPNKIYIKQTNKLPQTPTNTNPLGIDKMGRDILSRLILATRNS
ILLAFSYAAISAIIGIFIGIIIGNFKFKTCLIISKLIESLQTIPFFYVLMLILYYFSKQKNYNILEVSFILAIVHGWIKF
SFITRNNTLLIKNLDYIKTSKMMGASQYRIIMYHIFPEIFSSISSIIPLQISKSLTTFEVVNFLQQQDKSYYPSLGELLR
YIEMGKEYFWIWINPLIILLIINIILTSINLKLKKHTKFFISS

Sequences:

>Translated_283_residues
MNKFKRSYILLLSIFILFLIIIPNLINENSKFAIYKKDPNKIYIKQTNKLPQTPTNTNPLGIDKMGRDILSRLILATRNS
ILLAFSYAAISAIIGIFIGIIIGNFKFKTCLIISKLIESLQTIPFFYVLMLILYYFSKQKNYNILEVSFILAIVHGWIKF
SFITRNNTLLIKNLDYIKTSKMMGASQYRIIMYHIFPEIFSSISSIIPLQISKSLTTFEVVNFLQQQDKSYYPSLGELLR
YIEMGKEYFWIWINPLIILLIINIILTSINLKLKKHTKFFISS
>Mature_283_residues
MNKFKRSYILLLSIFILFLIIIPNLINENSKFAIYKKDPNKIYIKQTNKLPQTPTNTNPLGIDKMGRDILSRLILATRNS
ILLAFSYAAISAIIGIFIGIIIGNFKFKTCLIISKLIESLQTIPFFYVLMLILYYFSKQKNYNILEVSFILAIVHGWIKF
SFITRNNTLLIKNLDYIKTSKMMGASQYRIIMYHIFPEIFSSISSIIPLQISKSLTTFEVVNFLQQQDKSYYPSLGELLR
YIEMGKEYFWIWINPLIILLIINIILTSINLKLKKHTKFFISS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=194, Percent_Identity=29.3814432989691, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787054, Length=239, Percent_Identity=22.5941422594142, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787760, Length=212, Percent_Identity=24.0566037735849, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789964, Length=205, Percent_Identity=26.3414634146341, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32988; Mature: 32988

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFKRSYILLLSIFILFLIIIPNLINENSKFAIYKKDPNKIYIKQTNKLPQTPTNTNPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
GIDKMGRDILSRLILATRNSILLAFSYAAISAIIGIFIGIIIGNFKFKTCLIISKLIESL
CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QTIPFFYVLMLILYYFSKQKNYNILEVSFILAIVHGWIKFSFITRNNTLLIKNLDYIKTS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHH
KMMGASQYRIIMYHIFPEIFSSISSIIPLQISKSLTTFEVVNFLQQQDKSYYPSLGELLR
HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHH
YIEMGKEYFWIWINPLIILLIINIILTSINLKLKKHTKFFISS
HHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEECCEEEECC
>Mature Secondary Structure
MNKFKRSYILLLSIFILFLIIIPNLINENSKFAIYKKDPNKIYIKQTNKLPQTPTNTNPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
GIDKMGRDILSRLILATRNSILLAFSYAAISAIIGIFIGIIIGNFKFKTCLIISKLIESL
CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QTIPFFYVLMLILYYFSKQKNYNILEVSFILAIVHGWIKFSFITRNNTLLIKNLDYIKTS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCHHHHH
KMMGASQYRIIMYHIFPEIFSSISSIIPLQISKSLTTFEVVNFLQQQDKSYYPSLGELLR
HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHH
YIEMGKEYFWIWINPLIILLIINIILTSINLKLKKHTKFFISS
HHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]