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The map label for this gene is oppB-2 [C]

Identifier: 203284642

GI number: 203284642

Start: 805575

End: 806522

Strand: Reverse

Name: oppB-2 [C]

Synonym: BDU_752

Alternate gene names: 203284642

Gene position: 806522-805575 (Counterclockwise)

Preceding gene: 203284643

Following gene: 203284641

Centisome position: 86.57

GC content: 24.47

Gene sequence:

>948_bases
ATGGCGATTAATGTCATTATATCAACATTTTTTTGTATATCAATATTAAATGCATTTTCAAATAATCGTCCAAATATTCC
ATTCATAAAAACAAATATATTTAAAGACTATTTGGAATATATTGGATTAATTAAAAGCATTGAAAGCTACAAGTTAATAT
ATGATTTTGATCCAAATGCTCCATTAAGTAAAGATTATTTTGCCAAACACATCTCAGGATCTCTATACATAGTCTACAAA
ACTCAATATCAAGGAATAATCTGGAACACTACCTATAACACTCCTCTTATAAAAGGCAAATCACCAATAAGTGTCATTTT
TAGTAAAATAAAAAACACATTAACAATATCAATTCCAGGTTTAATATTATCTTACTTAATAGCCATTTTTTTTATTATTA
TATGGACATTTTTTGTAAAAAATAAAATTTTAAATAATATTTTAGAATATATAATGCTATTTTTACATTCACTACCAAGA
AACTTAATCATAATGTTAGTAATTACTATACTTTACTACCTCAACATAAATCAAAAAAACCTGATAATAGGTGGATTTGC
ATGGTTTTTTTCATTTTTCATATTTAACGCTGTAATTTTTAAACAATCCCTAACAAAAAATTTATCTGAACCTTATATAA
TAAGTGCAAAATCAAGGGGTATCAAAAATTTTTCAATAATAACATTTCACTCATTAATTCCCTCTTTAACTTCATTAATC
ACTCAACTCCGATCCACTCTTACAACATCATTCTTTGGTTCCTCTTTTATTGAGATAACATTTGGAATTGATGGGATTGG
GGCTTTAACAATTAATGCAATGAAAAATAACGATTATATAGTTTATAGAGACTTACTATTTGTTGGAGTATTAATTATGT
TAATAACAAATTTAATAACAGATATACTAACATACAATATGAATCCTTATAAGGATATATTAGAATAA

Upstream 100 bases:

>100_bases
CACTGATATTTTATTTTTTACTCAGTTATTTTGAAAAAATAAAAATTCTTCACCAAGGGAGGTAACTACAGCTATATTTA
TCATAAAAAATGTACTATAT

Downstream 100 bases:

>100_bases
TGAATAAATTTAAAAGATCATATATTTTATTATTGAGTATTTTCATTTTATTTCTAATAATAATTCCCAATTTAATAAAT
GAAAATTCAAAATTTGCAAT

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: Oligopeptide Transport System Permease Protein OppB

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAINVIISTFFCISILNAFSNNRPNIPFIKTNIFKDYLEYIGLIKSIESYKLIYDFDPNAPLSKDYFAKHISGSLYIVYK
TQYQGIIWNTTYNTPLIKGKSPISVIFSKIKNTLTISIPGLILSYLIAIFFIIIWTFFVKNKILNNILEYIMLFLHSLPR
NLIIMLVITILYYLNINQKNLIIGGFAWFFSFFIFNAVIFKQSLTKNLSEPYIISAKSRGIKNFSIITFHSLIPSLTSLI
TQLRSTLTTSFFGSSFIEITFGIDGIGALTINAMKNNDYIVYRDLLFVGVLIMLITNLITDILTYNMNPYKDILE

Sequences:

>Translated_315_residues
MAINVIISTFFCISILNAFSNNRPNIPFIKTNIFKDYLEYIGLIKSIESYKLIYDFDPNAPLSKDYFAKHISGSLYIVYK
TQYQGIIWNTTYNTPLIKGKSPISVIFSKIKNTLTISIPGLILSYLIAIFFIIIWTFFVKNKILNNILEYIMLFLHSLPR
NLIIMLVITILYYLNINQKNLIIGGFAWFFSFFIFNAVIFKQSLTKNLSEPYIISAKSRGIKNFSIITFHSLIPSLTSLI
TQLRSTLTTSFFGSSFIEITFGIDGIGALTINAMKNNDYIVYRDLLFVGVLIMLITNLITDILTYNMNPYKDILE
>Mature_314_residues
AINVIISTFFCISILNAFSNNRPNIPFIKTNIFKDYLEYIGLIKSIESYKLIYDFDPNAPLSKDYFAKHISGSLYIVYKT
QYQGIIWNTTYNTPLIKGKSPISVIFSKIKNTLTISIPGLILSYLIAIFFIIIWTFFVKNKILNNILEYIMLFLHSLPRN
LIIMLVITILYYLNINQKNLIIGGFAWFFSFFIFNAVIFKQSLTKNLSEPYIISAKSRGIKNFSIITFHSLIPSLTSLIT
QLRSTLTTSFFGSSFIEITFGIDGIGALTINAMKNNDYIVYRDLLFVGVLIMLITNLITDILTYNMNPYKDILE

Specific function: Part Of The Binding-Protein-Dependent Transport System For Dipeptides; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36177; Mature: 36046

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINVIISTFFCISILNAFSNNRPNIPFIKTNIFKDYLEYIGLIKSIESYKLIYDFDPNA
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
PLSKDYFAKHISGSLYIVYKTQYQGIIWNTTYNTPLIKGKSPISVIFSKIKNTLTISIPG
CCCHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEECCCCHHHHHHHHHCCEEEEEEHH
LILSYLIAIFFIIIWTFFVKNKILNNILEYIMLFLHSLPRNLIIMLVITILYYLNINQKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LIIGGFAWFFSFFIFNAVIFKQSLTKNLSEPYIISAKSRGIKNFSIITFHSLIPSLTSLI
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TQLRSTLTTSFFGSSFIEITFGIDGIGALTINAMKNNDYIVYRDLLFVGVLIMLITNLIT
HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH
DILTYNMNPYKDILE
HHHHCCCCHHHHHCC
>Mature Secondary Structure 
AINVIISTFFCISILNAFSNNRPNIPFIKTNIFKDYLEYIGLIKSIESYKLIYDFDPNA
CHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
PLSKDYFAKHISGSLYIVYKTQYQGIIWNTTYNTPLIKGKSPISVIFSKIKNTLTISIPG
CCCHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEECCCCHHHHHHHHHCCEEEEEEHH
LILSYLIAIFFIIIWTFFVKNKILNNILEYIMLFLHSLPRNLIIMLVITILYYLNINQKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LIIGGFAWFFSFFIFNAVIFKQSLTKNLSEPYIISAKSRGIKNFSIITFHSLIPSLTSLI
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TQLRSTLTTSFFGSSFIEITFGIDGIGALTINAMKNNDYIVYRDLLFVGVLIMLITNLIT
HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH
DILTYNMNPYKDILE
HHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA