| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is cht60 [H]
Identifier: 203284521
GI number: 203284521
Start: 659283
End: 660938
Strand: Reverse
Name: cht60 [H]
Synonym: BDU_623
Alternate gene names: 203284521
Gene position: 660938-659283 (Counterclockwise)
Preceding gene: 203284523
Following gene: 203284519
Centisome position: 70.94
GC content: 25.36
Gene sequence:
>1656_bases ATGAAAAAAATTATTTATATAATTGTTTTTTTAATTAATAATAATTGTTTTTGTTATGACTTTTGGAGTACAGAAAATAA AGAAAAACTAATAGAACAAATAGTAAGTCAAATGAATGACAAAGAATTATTGGGACAAATGTTTATGATAAGTTATCCAA AAGAAAAAATAACAAACTTCACCCTAAACTTCATCAAAGAAAAAAATTTAGGTGGAATCAAAATTTTTGGATGGAATGCA AAAAATTTATACAACTTAATAGAAAGTATAAATAAAGCACAAACAATTTCTCAAAAGAATAGATTTAAAATTCCCTTATT TATAGCAACAGATCAAGAAGGTGGATGGACACAACATATAAAACTTAAAACATCAAAAACAATAGGAAATCTTGGAATCA CAGCAACTTTATCACCAAATGATGCCTACTTTACTGGATATCATATAGCAAATGAATTAAAACAACTTGGAATTAACATA AATTTTGCCCCAATAACAGATATTTACAGTAATGAAGAAAATTTCATAATAGGCCCAAGAACATATTCAAATAATCCACA AATCGTATCTCTATTTGCATTGGCTTTCTATAAAGGACAAAAACAAGCAGGCATCATCTCAACAGCAAAACATTTTCCCG GACATGGCAATACTGTTATTGATTCTCATATAAAAATGCCAATAATCAATTCCGATTTAAAAGAAATTAAAACAAATGAA TTGCTGCCATATAAAATACTAATACAAGAAAACATTCCAATGATTATGAGCGGACACTTAGCATATCCAATGCTTACAAA CGGAAAAGAAATACCTGCATCCTCATCAACTAAAATTATCAAGGAAATTCTTAGGCAAGACTTAAAATACGACAATTTAA TAATAACAGACGACCTACTAATGAATGCAGTAAGATATCAAAATGAAAGCATTTATGACACAATTGAACGAATTATTAGA ACAGAAACTGATATTTTATTAATATCATTAAATGAAGATATACAAAATAATGCTTACAATCAACTATTAAACCTCATGCA AAAAGACAATACAATAAAAGAAAACATTATTAAATCTAACAAAAGAATACTTAGAATAAAATTAGAATATCTAAAAGAAA AAAGAAACAAAGAAGAACTTTTCCCAAAATATGACAATGCTAAAGAAATACCTACTAAAGAAGCTGAATTTTTTTTTGAA CAAAATACATTAAGAAGTATAACAAAAATAAAACTATCAAAAAAAATATCAAAGCATAAAAAAACGCTATTAATATCACC TTATAATACAATGATTAAAGAAGGTAAAAAAATATTTCAAAATAGTTATGGCTATTATTATAATTATTATCCACTAAATA GCATAAATACCACACAATTAAAAGAAATAAAAAATTTAATTGCACAATATGAACAAGTTATTTTTAATGTATCAACACCT GCTAGTTTAGAGTACATAAAAAATTTAAAAGAATATAAAAATAAAATAAGCATCATTGTATCTCTTACCCCCCAACACAT TAAACAACTGAACTGGATAGAAAACATAGTAGTAGTATATGGAACTACAACACTATCATTTAAATCTGGATTTTTAACTT TAACAGAAGATTTTAATCCAAAAGGACAAATACCTTTAATGAATCTCAAGAATTAA
Upstream 100 bases:
>100_bases ATATATTCAAAAAATTTTAAAATAATAAGGAACTTGAAATAAGTAAACTTAAAACAATATGATATACTTATGAATCAAAA AAAGATTAGTATGGTTTCAA
Downstream 100 bases:
>100_bases TAGCATCTTTAATATATGCAATTATTTGATTTTCTAAAAGGTTTAAAGCAGTATTTTTAATCTTAAATCCACTAGCATGT TTATGTCCCCCTCCTCCAAA
Product: beta-glucosidase, putative
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; Chitobiase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKKIIYIIVFLINNNCFCYDFWSTENKEKLIEQIVSQMNDKELLGQMFMISYPKEKITNFTLNFIKEKNLGGIKIFGWNA KNLYNLIESINKAQTISQKNRFKIPLFIATDQEGGWTQHIKLKTSKTIGNLGITATLSPNDAYFTGYHIANELKQLGINI NFAPITDIYSNEENFIIGPRTYSNNPQIVSLFALAFYKGQKQAGIISTAKHFPGHGNTVIDSHIKMPIINSDLKEIKTNE LLPYKILIQENIPMIMSGHLAYPMLTNGKEIPASSSTKIIKEILRQDLKYDNLIITDDLLMNAVRYQNESIYDTIERIIR TETDILLISLNEDIQNNAYNQLLNLMQKDNTIKENIIKSNKRILRIKLEYLKEKRNKEELFPKYDNAKEIPTKEAEFFFE QNTLRSITKIKLSKKISKHKKTLLISPYNTMIKEGKKIFQNSYGYYYNYYPLNSINTTQLKEIKNLIAQYEQVIFNVSTP ASLEYIKNLKEYKNKISIIVSLTPQHIKQLNWIENIVVVYGTTTLSFKSGFLTLTEDFNPKGQIPLMNLKN
Sequences:
>Translated_551_residues MKKIIYIIVFLINNNCFCYDFWSTENKEKLIEQIVSQMNDKELLGQMFMISYPKEKITNFTLNFIKEKNLGGIKIFGWNA KNLYNLIESINKAQTISQKNRFKIPLFIATDQEGGWTQHIKLKTSKTIGNLGITATLSPNDAYFTGYHIANELKQLGINI NFAPITDIYSNEENFIIGPRTYSNNPQIVSLFALAFYKGQKQAGIISTAKHFPGHGNTVIDSHIKMPIINSDLKEIKTNE LLPYKILIQENIPMIMSGHLAYPMLTNGKEIPASSSTKIIKEILRQDLKYDNLIITDDLLMNAVRYQNESIYDTIERIIR TETDILLISLNEDIQNNAYNQLLNLMQKDNTIKENIIKSNKRILRIKLEYLKEKRNKEELFPKYDNAKEIPTKEAEFFFE QNTLRSITKIKLSKKISKHKKTLLISPYNTMIKEGKKIFQNSYGYYYNYYPLNSINTTQLKEIKNLIAQYEQVIFNVSTP ASLEYIKNLKEYKNKISIIVSLTPQHIKQLNWIENIVVVYGTTTLSFKSGFLTLTEDFNPKGQIPLMNLKN >Mature_551_residues MKKIIYIIVFLINNNCFCYDFWSTENKEKLIEQIVSQMNDKELLGQMFMISYPKEKITNFTLNFIKEKNLGGIKIFGWNA KNLYNLIESINKAQTISQKNRFKIPLFIATDQEGGWTQHIKLKTSKTIGNLGITATLSPNDAYFTGYHIANELKQLGINI NFAPITDIYSNEENFIIGPRTYSNNPQIVSLFALAFYKGQKQAGIISTAKHFPGHGNTVIDSHIKMPIINSDLKEIKTNE LLPYKILIQENIPMIMSGHLAYPMLTNGKEIPASSSTKIIKEILRQDLKYDNLIITDDLLMNAVRYQNESIYDTIERIIR TETDILLISLNEDIQNNAYNQLLNLMQKDNTIKENIIKSNKRILRIKLEYLKEKRNKEELFPKYDNAKEIPTKEAEFFFE QNTLRSITKIKLSKKISKHKKTLLISPYNTMIKEGKKIFQNSYGYYYNYYPLNSINTTQLKEIKNLIAQYEQVIFNVSTP ASLEYIKNLKEYKNKISIIVSLTPQHIKQLNWIENIVVVYGTTTLSFKSGFLTLTEDFNPKGQIPLMNLKN
Specific function: Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=240, Percent_Identity=31.6666666666667, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 63842; Mature: 63842
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIYIIVFLINNNCFCYDFWSTENKEKLIEQIVSQMNDKELLGQMFMISYPKEKITNF CCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCHHHHHHH TLNFIKEKNLGGIKIFGWNAKNLYNLIESINKAQTISQKNRFKIPLFIATDQEGGWTQHI HEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEE KLKTSKTIGNLGITATLSPNDAYFTGYHIANELKQLGININFAPITDIYSNEENFIIGPR EEEECCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCEEEEECHHHHCCCCCEEECCE TYSNNPQIVSLFALAFYKGQKQAGIISTAKHFPGHGNTVIDSHIKMPIINSDLKEIKTNE EECCCCCHHHHHHHHHHCCCCCCCEEEHHHCCCCCCCEEEECCEECCEECCHHHHHHCCC LLPYKILIQENIPMIMSGHLAYPMLTNGKEIPASSSTKIIKEILRQDLKYDNLIITDDLL CCCEEEEEECCCCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHH MNAVRYQNESIYDTIERIIRTETDILLISLNEDIQNNAYNQLLNLMQKDNTIKENIIKSN HHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCC KRILRIKLEYLKEKRNKEELFPKYDNAKEIPTKEAEFFFEQNTLRSITKIKLSKKISKHK CEEEEEEHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC KTLLISPYNTMIKEGKKIFQNSYGYYYNYYPLNSINTTQLKEIKNLIAQYEQVIFNVSTP CEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCC ASLEYIKNLKEYKNKISIIVSLTPQHIKQLNWIENIVVVYGTTTLSFKSGFLTLTEDFNP HHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHCCEEEEEECEEEEECCCEEEEEECCCC KGQIPLMNLKN CCCEEEECCCC >Mature Secondary Structure MKKIIYIIVFLINNNCFCYDFWSTENKEKLIEQIVSQMNDKELLGQMFMISYPKEKITNF CCEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHEECCHHHHHHH TLNFIKEKNLGGIKIFGWNAKNLYNLIESINKAQTISQKNRFKIPLFIATDQEGGWTQHI HEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEE KLKTSKTIGNLGITATLSPNDAYFTGYHIANELKQLGININFAPITDIYSNEENFIIGPR EEEECCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCEEEEECHHHHCCCCCEEECCE TYSNNPQIVSLFALAFYKGQKQAGIISTAKHFPGHGNTVIDSHIKMPIINSDLKEIKTNE EECCCCCHHHHHHHHHHCCCCCCCEEEHHHCCCCCCCEEEECCEECCEECCHHHHHHCCC LLPYKILIQENIPMIMSGHLAYPMLTNGKEIPASSSTKIIKEILRQDLKYDNLIITDDLL CCCEEEEEECCCCEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHH MNAVRYQNESIYDTIERIIRTETDILLISLNEDIQNNAYNQLLNLMQKDNTIKENIIKSN HHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCC KRILRIKLEYLKEKRNKEELFPKYDNAKEIPTKEAEFFFEQNTLRSITKIKLSKKISKHK CEEEEEEHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC KTLLISPYNTMIKEGKKIFQNSYGYYYNYYPLNSINTTQLKEIKNLIAQYEQVIFNVSTP CEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCC ASLEYIKNLKEYKNKISIIVSLTPQHIKQLNWIENIVVVYGTTTLSFKSGFLTLTEDFNP HHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHCCEEEEEECEEEEECCCEEEEEECCCC KGQIPLMNLKN CCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8063094 [H]