| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284322
Identifier: 203284322
GI number: 203284322
Start: 435720
End: 436316
Strand: Reverse
Name: 203284322
Synonym: BDU_406
Alternate gene names: NA
Gene position: 436316-435720 (Counterclockwise)
Preceding gene: 203284323
Following gene: 203284318
Centisome position: 46.83
GC content: 26.13
Gene sequence:
>597_bases ATGTTCAATCGAATTTTTTTTGATGAAGATATTAAATATGAATTTTATAGAAAATTTTTTCATATCTCAAGTTTAGTGTT TTTATTATTATATAAAGTGAATTTGTGGATAGGTTTTGTTGCAAGCTTGTTTTTTATGGTTATTTACCTGATATTAGAAT TGTTAAGAGTCATGCAAAAAAAATTATTTTTTTTAGGAGATATATCAGAAATACTAGTGAAAACTAGAGAAGTCTCTTTT TGTAAAATATATCTCTCTCCAATATTTTTAGTAGTCAGTATGTTTTGTACTTATTTTTTTATAGCTAAACCTTTTAGTTA TATTGGAATATTTTCTGCATGTATTGGAGATGGGCTTGCAAGTCTTTTTGGTAAGCTTATTCCATCTTTTAAACTTGTAA ATAATAAAACGTTTGCAGGAAGTATTTCTGTTTTTGTTGTTGCTTTTATAGTATGCTATTATTTTGTTCCCAATTTTGTT ATGGCATTAATTGTTGGTATGGGAGCTATGCTTGTTGAACTTTTTGATTTTGCAAAATACGATAATTTATTTTTGCCTGT AGGGGTTGCAACTTTATCTTTTTTATTGGTAACTTGA
Upstream 100 bases:
>100_bases TAATTCCACCAAATCTTGCTTATGGAGATAGAGATTTTACCAGTATGATAAAAGCAAATTCTTTTTTAAAATTTAATATT ATTTTAAGGAAAGTTAATTA
Downstream 100 bases:
>100_bases ATTTATTGAGCTTGACTTTTTATAGCCAATAAAAAAAGAGTTTGCCTGATTCTTGTAAGTATATTGGTACTCCTATTGAA ATTGGTATGAATGCATAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MFNRIFFDEDIKYEFYRKFFHISSLVFLLLYKVNLWIGFVASLFFMVIYLILELLRVMQKKLFFLGDISEILVKTREVSF CKIYLSPIFLVVSMFCTYFFIAKPFSYIGIFSACIGDGLASLFGKLIPSFKLVNNKTFAGSISVFVVAFIVCYYFVPNFV MALIVGMGAMLVELFDFAKYDNLFLPVGVATLSFLLVT
Sequences:
>Translated_198_residues MFNRIFFDEDIKYEFYRKFFHISSLVFLLLYKVNLWIGFVASLFFMVIYLILELLRVMQKKLFFLGDISEILVKTREVSF CKIYLSPIFLVVSMFCTYFFIAKPFSYIGIFSACIGDGLASLFGKLIPSFKLVNNKTFAGSISVFVVAFIVCYYFVPNFV MALIVGMGAMLVELFDFAKYDNLFLPVGVATLSFLLVT >Mature_198_residues MFNRIFFDEDIKYEFYRKFFHISSLVFLLLYKVNLWIGFVASLFFMVIYLILELLRVMQKKLFFLGDISEILVKTREVSF CKIYLSPIFLVVSMFCTYFFIAKPFSYIGIFSACIGDGLASLFGKLIPSFKLVNNKTFAGSISVFVVAFIVCYYFVPNFV MALIVGMGAMLVELFDFAKYDNLFLPVGVATLSFLLVT
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22826; Mature: 22826
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNRIFFDEDIKYEFYRKFFHISSLVFLLLYKVNLWIGFVASLFFMVIYLILELLRVMQK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLFFLGDISEILVKTREVSFCKIYLSPIFLVVSMFCTYFFIAKPFSYIGIFSACIGDGLA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFGKLIPSFKLVNNKTFAGSISVFVVAFIVCYYFVPNFVMALIVGMGAMLVELFDFAKY HHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNLFLPVGVATLSFLLVT CCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFNRIFFDEDIKYEFYRKFFHISSLVFLLLYKVNLWIGFVASLFFMVIYLILELLRVMQK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLFFLGDISEILVKTREVSFCKIYLSPIFLVVSMFCTYFFIAKPFSYIGIFSACIGDGLA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFGKLIPSFKLVNNKTFAGSISVFVVAFIVCYYFVPNFVMALIVGMGAMLVELFDFAKY HHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNLFLPVGVATLSFLLVT CCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA