| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284262
Identifier: 203284262
GI number: 203284262
Start: 367797
End: 368999
Strand: Reverse
Name: 203284262
Synonym: BDU_344
Alternate gene names: NA
Gene position: 368999-367797 (Counterclockwise)
Preceding gene: 203284263
Following gene: 203284261
Centisome position: 39.61
GC content: 26.85
Gene sequence:
>1203_bases ATGGACAGAAGCGATTTCATTAGATTTGGAGATTTTTTAAAAAAAACTCGGATTGATAAGGGCTTTACTTTGGAGATGAT AGCTGATGATATTAGGATTTCTATTAAATATCTTAGAGCACTTGAAGATTCTAATATTGAATCATTTCCAAATGAAGTTT TGGCTGTGGGTTTTTTAAGGACTTATAGTGAATATTTGGGAGTTGATGTTTGGTATGTTTCATCTCTCTTTAAAGAATAT AAGAGAAGACTTAATAGTAATTATATTGGTATTAAGTCTGATGATCAAAATGGTAGTGTAACTTTTGTAAGTGAGAGTAA GCTTGGAAATAAATATTTTGATATAACTAATATAGGTTTTTCTAAGATAATTAAGATATTAGTGGGAGTGGTTGGGATTG TATTTCTAGTGTTTGTAGTTACAAATATTAGTGGTTTTAAACAAATTTTAGGAAGAATTTTTAAGGCAAATTATGTTGGA AAAAGAGTACCAGAGGTTCATGAGGTTTTATTTGATAAAGAAAATTTTTGGAATGTTGTGCTTGGAGAAGGTGATTTTTT GTCCTTAATTTTTGGAAATTCTATTGCAAAATATAGAGTTTCTTTTATGAACGATGATTTGGTTATTACAAATGATTTAG AAAATGAGCAATATGTTTTTAATTTAGGCAAATTTCGAGAAGTTGATTTGAATGGTAATATAAGAGTTAAAATTGTATAT GATAATTATTCTCAAGATAAGGTTAGAAAGGCTCATGTAAGTTTGGAATCTTTTATGCTTAATGTTGAATATGTTTTTGA GACCAATCTTTCTAATAGATTTAATGTTGTAAATTGGGGATTTGAAGTTAATGGTCCTAAAAATAGAGTGATTAGTGAAT ATCCTACAGTATATTCTTCTACAAATATTTCTGATATTAATTTATCAATTAATTTTTTAAATGATACGTTTTTACGATAT GTTGATGAGAATAATCTTTATGGTAAGTCTTTGCTTTTATTGAAGGGAAGTGATCCTTTAAATTTAAATTTTAAAAAGTC TTTAATTTTGTTTTTTACAAGACTTTCTGATGTTAATATTGTTCTTCAAGGTAAGGATGTTACTTCTGTTTTAAAAAGTT ATGGAAGTGAAATGATAGCAATTCAATTTTTTTGGTTAAAAACACCAGGTGGTTTTGATCTTAAAGTTTCTGAAGTTTAT TGA
Upstream 100 bases:
>100_bases TTGGAATTTCTGATAGTAAATTTAAATATGATCTGCCTAAGAATGCAAATAAGGTGGATAATTTTTTATATGATGTTAAA AAGACCTGAGGTGTTAATAT
Downstream 100 bases:
>100_bases TGAGTGAAATACAAAAATTTCTTTTTAGTTTAAATTTTGATCAAAAGCAAATTGTCTTTGATGATACTACGAACCCCATT CTTGTTTTGGCAGGGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDRSDFIRFGDFLKKTRIDKGFTLEMIADDIRISIKYLRALEDSNIESFPNEVLAVGFLRTYSEYLGVDVWYVSSLFKEY KRRLNSNYIGIKSDDQNGSVTFVSESKLGNKYFDITNIGFSKIIKILVGVVGIVFLVFVVTNISGFKQILGRIFKANYVG KRVPEVHEVLFDKENFWNVVLGEGDFLSLIFGNSIAKYRVSFMNDDLVITNDLENEQYVFNLGKFREVDLNGNIRVKIVY DNYSQDKVRKAHVSLESFMLNVEYVFETNLSNRFNVVNWGFEVNGPKNRVISEYPTVYSSTNISDINLSINFLNDTFLRY VDENNLYGKSLLLLKGSDPLNLNFKKSLILFFTRLSDVNIVLQGKDVTSVLKSYGSEMIAIQFFWLKTPGGFDLKVSEVY
Sequences:
>Translated_400_residues MDRSDFIRFGDFLKKTRIDKGFTLEMIADDIRISIKYLRALEDSNIESFPNEVLAVGFLRTYSEYLGVDVWYVSSLFKEY KRRLNSNYIGIKSDDQNGSVTFVSESKLGNKYFDITNIGFSKIIKILVGVVGIVFLVFVVTNISGFKQILGRIFKANYVG KRVPEVHEVLFDKENFWNVVLGEGDFLSLIFGNSIAKYRVSFMNDDLVITNDLENEQYVFNLGKFREVDLNGNIRVKIVY DNYSQDKVRKAHVSLESFMLNVEYVFETNLSNRFNVVNWGFEVNGPKNRVISEYPTVYSSTNISDINLSINFLNDTFLRY VDENNLYGKSLLLLKGSDPLNLNFKKSLILFFTRLSDVNIVLQGKDVTSVLKSYGSEMIAIQFFWLKTPGGFDLKVSEVY >Mature_400_residues MDRSDFIRFGDFLKKTRIDKGFTLEMIADDIRISIKYLRALEDSNIESFPNEVLAVGFLRTYSEYLGVDVWYVSSLFKEY KRRLNSNYIGIKSDDQNGSVTFVSESKLGNKYFDITNIGFSKIIKILVGVVGIVFLVFVVTNISGFKQILGRIFKANYVG KRVPEVHEVLFDKENFWNVVLGEGDFLSLIFGNSIAKYRVSFMNDDLVITNDLENEQYVFNLGKFREVDLNGNIRVKIVY DNYSQDKVRKAHVSLESFMLNVEYVFETNLSNRFNVVNWGFEVNGPKNRVISEYPTVYSSTNISDINLSINFLNDTFLRY VDENNLYGKSLLLLKGSDPLNLNFKKSLILFFTRLSDVNIVLQGKDVTSVLKSYGSEMIAIQFFWLKTPGGFDLKVSEVY
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46025; Mature: 46025
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSDFIRFGDFLKKTRIDKGFTLEMIADDIRISIKYLRALEDSNIESFPNEVLAVGFLR CCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH TYSEYLGVDVWYVSSLFKEYKRRLNSNYIGIKSDDQNGSVTFVSESKLGNKYFDITNIGF HHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCH SKIIKILVGVVGIVFLVFVVTNISGFKQILGRIFKANYVGKRVPEVHEVLFDKENFWNVV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEE LGEGDFLSLIFGNSIAKYRVSFMNDDLVITNDLENEQYVFNLGKFREVDLNGNIRVKIVY ECCCCEEEEEECCCCEEEEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCEEEEEEE DNYSQDKVRKAHVSLESFMLNVEYVFETNLSNRFNVVNWGFEVNGPKNRVISEYPTVYSS CCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECEEECCCCCCCHHHCCCEECC TNISDINLSINFLNDTFLRYVDENNLYGKSLLLLKGSDPLNLNFKKSLILFFTRLSDVNI CCEEEEEEEEEECCCHHHHEECCCCCCCCEEEEEECCCCCCCCHHHHEEEEEEEECCEEE VLQGKDVTSVLKSYGSEMIAIQFFWLKTPGGFDLKVSEVY EEECCCHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MDRSDFIRFGDFLKKTRIDKGFTLEMIADDIRISIKYLRALEDSNIESFPNEVLAVGFLR CCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH TYSEYLGVDVWYVSSLFKEYKRRLNSNYIGIKSDDQNGSVTFVSESKLGNKYFDITNIGF HHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCH SKIIKILVGVVGIVFLVFVVTNISGFKQILGRIFKANYVGKRVPEVHEVLFDKENFWNVV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEE LGEGDFLSLIFGNSIAKYRVSFMNDDLVITNDLENEQYVFNLGKFREVDLNGNIRVKIVY ECCCCEEEEEECCCCEEEEEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCEEEEEEE DNYSQDKVRKAHVSLESFMLNVEYVFETNLSNRFNVVNWGFEVNGPKNRVISEYPTVYSS CCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECEEECCCCCCCHHHCCCEECC TNISDINLSINFLNDTFLRYVDENNLYGKSLLLLKGSDPLNLNFKKSLILFFTRLSDVNI CCEEEEEEEEEECCCHHHHEECCCCCCCCEEEEEECCCCCCCCHHHHEEEEEEEECCEEE VLQGKDVTSVLKSYGSEMIAIQFFWLKTPGGFDLKVSEVY EEECCCHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA