| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284237
Identifier: 203284237
GI number: 203284237
Start: 337565
End: 338371
Strand: Reverse
Name: 203284237
Synonym: BDU_319
Alternate gene names: NA
Gene position: 338371-337565 (Counterclockwise)
Preceding gene: 203284238
Following gene: 203284234
Centisome position: 36.32
GC content: 24.04
Gene sequence:
>807_bases GTGTTTAGTATTTTTTTGCATTCTATAATATTTGCATATTTAGCTCTTGGTATTCTTTATACTGAGAGAGTAGGGCTTTT AAATATATCTATAGAGGGAATTTCTTTTTTGTCTGTTTTTTTGACTTCTCTTTTTATATATTGGGGCTATGGAATATTTA TTTCAGTTATTATGACAATTTGTATTAGTTTACTTTTTGGTTGTTTTTTATCTTTTATTGCAATAAATGGTTATAATATT TTTATAACGGGTATAGGAATTAATATATTGTGTAATTTCTTGGTTAGAATTTTAATGAGAGCTAATTTCAATTTTATTCC AGGATTTAGTTTAAATATTTCCAATAATATTGCCATTATTTTTTTTGTTATATTTTTTTTTACTTTTTTAAGTTTTAGTA TTTATGTAATAAATTATTCAAAAGTTAGGGTAGTATTTGAATTTATTCGTTCAAATGATTATGAAAATGTATTAGGTGAA CAGACTAGTAATTATTTTAAGTCTTTTGCTATTTTTGTTTCTGTAATATCGGCAAGTGTTGCGGGTTCATTGCTTGCTAT AAATTTCAATGTTTATTCTTATGATTTGGGATTGAATAATGGTTGGCTTGCTATTTGTATATTGTATATTGCATTTGCAA ATCCCTGGCTTATTTTGCCAAGTTCATTTTTTATGGTGTTTATTGAATACAAATTTTTTAATCTTCAAGATTATGTTAAT TCTTATTTTGCACTTTCTTTGCCTTTTTATATGGCTATATTGATTAATGTATTTGCTGCTTTTTTTAGAAAAACTAAATT ATTTTAG
Upstream 100 bases:
>100_bases TCTTAAAATAAATTATTCATTTAAGTATGAATTTATTGGTTTATATCAGGCCATTTCTATTTTCATTGCATTGTTTTTTA TTAATACGGGTAAAAAGTAG
Downstream 100 bases:
>100_bases AGGTTGTTATTTTCATTTTTAAGATTTTTTAAAGTTTTAATCTGTAATTCCAAATCTTCGATTTTAGTTTTATTAAATTC ATAAAAAGGAATTTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MFSIFLHSIIFAYLALGILYTERVGLLNISIEGISFLSVFLTSLFIYWGYGIFISVIMTICISLLFGCFLSFIAINGYNI FITGIGINILCNFLVRILMRANFNFIPGFSLNISNNIAIIFFVIFFFTFLSFSIYVINYSKVRVVFEFIRSNDYENVLGE QTSNYFKSFAIFVSVISASVAGSLLAINFNVYSYDLGLNNGWLAICILYIAFANPWLILPSSFFMVFIEYKFFNLQDYVN SYFALSLPFYMAILINVFAAFFRKTKLF
Sequences:
>Translated_268_residues MFSIFLHSIIFAYLALGILYTERVGLLNISIEGISFLSVFLTSLFIYWGYGIFISVIMTICISLLFGCFLSFIAINGYNI FITGIGINILCNFLVRILMRANFNFIPGFSLNISNNIAIIFFVIFFFTFLSFSIYVINYSKVRVVFEFIRSNDYENVLGE QTSNYFKSFAIFVSVISASVAGSLLAINFNVYSYDLGLNNGWLAICILYIAFANPWLILPSSFFMVFIEYKFFNLQDYVN SYFALSLPFYMAILINVFAAFFRKTKLF >Mature_268_residues MFSIFLHSIIFAYLALGILYTERVGLLNISIEGISFLSVFLTSLFIYWGYGIFISVIMTICISLLFGCFLSFIAINGYNI FITGIGINILCNFLVRILMRANFNFIPGFSLNISNNIAIIFFVIFFFTFLSFSIYVINYSKVRVVFEFIRSNDYENVLGE QTSNYFKSFAIFVSVISASVAGSLLAINFNVYSYDLGLNNGWLAICILYIAFANPWLILPSSFFMVFIEYKFFNLQDYVN SYFALSLPFYMAILINVFAAFFRKTKLF
Specific function: Unknown
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30761; Mature: 30761
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIFLHSIIFAYLALGILYTERVGLLNISIEGISFLSVFLTSLFIYWGYGIFISVIMTI CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH CISLLFGCFLSFIAINGYNIFITGIGINILCNFLVRILMRANFNFIPGFSLNISNNIAII HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHH FFVIFFFTFLSFSIYVINYSKVRVVFEFIRSNDYENVLGEQTSNYFKSFAIFVSVISASV HHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSLLAINFNVYSYDLGLNNGWLAICILYIAFANPWLILPSSFFMVFIEYKFFNLQDYVN CCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCHHHHHH SYFALSLPFYMAILINVFAAFFRKTKLF HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSIFLHSIIFAYLALGILYTERVGLLNISIEGISFLSVFLTSLFIYWGYGIFISVIMTI CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH CISLLFGCFLSFIAINGYNIFITGIGINILCNFLVRILMRANFNFIPGFSLNISNNIAII HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHH FFVIFFFTFLSFSIYVINYSKVRVVFEFIRSNDYENVLGEQTSNYFKSFAIFVSVISASV HHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSLLAINFNVYSYDLGLNNGWLAICILYIAFANPWLILPSSFFMVFIEYKFFNLQDYVN CCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCHHHHHH SYFALSLPFYMAILINVFAAFFRKTKLF HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA