Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203284219

Identifier: 203284219

GI number: 203284219

Start: 320798

End: 321487

Strand: Reverse

Name: 203284219

Synonym: BDU_301

Alternate gene names: NA

Gene position: 321487-320798 (Counterclockwise)

Preceding gene: 203284220

Following gene: 203284218

Centisome position: 34.51

GC content: 27.97

Gene sequence:

>690_bases
ATGAAGAGATGTGTATCGGTATTTTTGTTACTATGGGTTTCTTGTGGTGATGGAGCTAAAGAAAAATCAAATCTTGGACT
TAGAATCAGAGAAGTGGAATTATCTGGTGGTGGTTCATTAGAAAAGGTAGAAGTTTATAAAGAATTTATTGATAGGGAAG
AAAAAAATGTTTTAAAAATAATAAATTCTATTGATAAGAAGGCCAGGTTTTTTATCTTAATTGGTCTTGAGCTTATTAAG
CTTGGTCAATATTTGCCTGCTATTGAATATTTAAATAAAAATTTAGAGTATGGACCCGATAATCATTTGTCTCATTTTTA
TATAGGTGTTTCTTCTTATAATTTAGCTAAGGGAATGCAAACTCAAGACAAGATAGAGGAGTATTTTACTCTTGCTGAAA
ATTCTTTTTTAAAATCGATATCTCTTAAAGATGATTTTAAGGAAGCAATTTTTGCTCTCTCTACTATGTATGTTTATGAT
CTTGATAAGCAATTAGAAGCTAAAGGTTATTTAAGTAAACTTGAATTTATGGGAGAAAATTATTTTGAGTTTTTGATGTT
AAGAGGTGCAAATTATTATTCTCTTGGTGATTTTAATAATGCTTTATTATTTTATAATAAAGCAAAAAGTAAGGCTTCAA
CTCAAGAACAGATAGAGGGAGTTAGTAAAATAATAAATGATTTTAAGTAG

Upstream 100 bases:

>100_bases
TAATTTTATAGCAAAATCAAAAAATGTGAATTATTTTGAAGATGATATTGATGTTCCCACATTTCTTAGAAATTTAAATA
AGAAAAATGGCGACAATTGA

Downstream 100 bases:

>100_bases
TTTTTATGTGCAAATTACTTTATGTTGATAATTTAAAATTTTTAAAGAGCAAAGAAAAGCTTAGGATTTTTAATAATTTT
GATTTCAATGAACTTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK
LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD
LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK

Sequences:

>Translated_229_residues
MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK
LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD
LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK
>Mature_229_residues
MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKIINSIDKKARFFILIGLELIK
LGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQTQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYD
LDKQLEAKGYLSKLEFMGENYFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 26319; Mature: 26319

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKI
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHH
INSIDKKARFFILIGLELIKLGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQ
HHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCC
TQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYDLDKQLEAKGYLSKLEFMGEN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
YFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK
HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRCVSVFLLLWVSCGDGAKEKSNLGLRIREVELSGGGSLEKVEVYKEFIDREEKNVLKI
CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHH
INSIDKKARFFILIGLELIKLGQYLPAIEYLNKNLEYGPDNHLSHFYIGVSSYNLAKGMQ
HHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCC
TQDKIEEYFTLAENSFLKSISLKDDFKEAIFALSTMYVYDLDKQLEAKGYLSKLEFMGEN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCH
YFEFLMLRGANYYSLGDFNNALLFYNKAKSKASTQEQIEGVSKIINDFK
HHHHHHHCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]