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The map label for this gene is flgD [H]

Identifier: 203284205

GI number: 203284205

Start: 308981

End: 309421

Strand: Reverse

Name: flgD [H]

Synonym: BDU_287

Alternate gene names: 203284205

Gene position: 309421-308981 (Counterclockwise)

Preceding gene: 203284206

Following gene: 203284204

Centisome position: 33.21

GC content: 27.66

Gene sequence:

>441_bases
ATGAATACAATTAGTAATATTGATAATTTAGTTAATATAGGGCAGTCTAAAAAAATAGTTAATGCTGGATTAAAAAGAGA
TAGGGATATTAAGGGAAGTAATTTGGGTAGAGATGATTTTTTGAAATTGCTTCTTACTCAGCTTAAATATCAAGATCCTA
CAGAGCCAATGAAAGATAAAGAATTTATTTCTCAAATGGCACAGTTTTCGGCACTTGAACAGATGACAAATATGAGTAAA
TCTTTTGAAAATTTATCATCTATCCTTGGTGTAAATAAGGATTTGAATTTATTAGGGAAAATAGTTGAATTTGAAAATGT
TGAAGGAAAAATTATTAAAGGTAAAGTTACAAGTGTAAAGGCAGGAGTAAATCCACAAATTATGATTGATGGAAAATATT
ATGTTTATAATAATGTTTTATCAGTAGGATTGGAGGAGTAA

Upstream 100 bases:

>100_bases
TTCTTTAAAGGAGAGTCAGGTTTTTAGAATTGAAGATTATGTTGAATTTTCTGGTGATTTAGAGGAAAATGTTAATTTAA
TTGTTTAAAATGGAGGATAG

Downstream 100 bases:

>100_bases
TTATATGATGAGATCTTTGTATTCTGGTGTTTCTGGGTTGCAGAATCATCAAACAAGAATGGATGTTGTTGGTAATAACA
TTTCAAATGTTAATACCGTT

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNTISNIDNLVNIGQSKKIVNAGLKRDRDIKGSNLGRDDFLKLLLTQLKYQDPTEPMKDKEFISQMAQFSALEQMTNMSK
SFENLSSILGVNKDLNLLGKIVEFENVEGKIIKGKVTSVKAGVNPQIMIDGKYYVYNNVLSVGLEE

Sequences:

>Translated_146_residues
MNTISNIDNLVNIGQSKKIVNAGLKRDRDIKGSNLGRDDFLKLLLTQLKYQDPTEPMKDKEFISQMAQFSALEQMTNMSK
SFENLSSILGVNKDLNLLGKIVEFENVEGKIIKGKVTSVKAGVNPQIMIDGKYYVYNNVLSVGLEE
>Mature_146_residues
MNTISNIDNLVNIGQSKKIVNAGLKRDRDIKGSNLGRDDFLKLLLTQLKYQDPTEPMKDKEFISQMAQFSALEQMTNMSK
SFENLSSILGVNKDLNLLGKIVEFENVEGKIIKGKVTSVKAGVNPQIMIDGKYYVYNNVLSVGLEE

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 16331; Mature: 16331

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTISNIDNLVNIGQSKKIVNAGLKRDRDIKGSNLGRDDFLKLLLTQLKYQDPTEPMKDK
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
EFISQMAQFSALEQMTNMSKSFENLSSILGVNKDLNLLGKIVEFENVEGKIIKGKVTSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECEEEEEE
AGVNPQIMIDGKYYVYNNVLSVGLEE
CCCCCEEEECCCEEEHHHHHHHCCCC
>Mature Secondary Structure
MNTISNIDNLVNIGQSKKIVNAGLKRDRDIKGSNLGRDDFLKLLLTQLKYQDPTEPMKDK
CCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
EFISQMAQFSALEQMTNMSKSFENLSSILGVNKDLNLLGKIVEFENVEGKIIKGKVTSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECEEEEEE
AGVNPQIMIDGKYYVYNNVLSVGLEE
CCCCCEEEECCCEEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]