Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is flbC

Identifier: 203284206

GI number: 203284206

Start: 309434

End: 310603

Strand: Reverse

Name: flbC

Synonym: BDU_288

Alternate gene names: NA

Gene position: 310603-309434 (Counterclockwise)

Preceding gene: 203284207

Following gene: 203284205

Centisome position: 33.34

GC content: 24.02

Gene sequence:

>1170_bases
ATGAGTAATTTAAGTAAAATTATTGATGTTAATTTATCAAAGTTAAATAAAAATTTTAATTTTATAAATGCTAGTTTATT
AAGTCAAGATAAAAAGGGTGGTTTTGCAGATTTTATTTCTTCAGAAATTCAAAGTATGTCTAAATTAAGAATTTCATTGT
TAGAGTTTTTAAAGAGTAATGGGCTTATAAATAAAAGTTCTAAAAATCTTTCTTTAAATCATTCTTTTGTGTTGGAAAAA
TTTAAAGATAAAGATTTTATGTCTGACTTTAAATCCTTGCTTAAAGAAACAGGAAGTTTATTTGATTTTGAAAGTTTGAA
AAATTTAAGAGAAAATTTATCTTTTGATTCTGAATTTGTTGATAGAAGAGAAATGTTAAGTAATGTTGAGAAGGTCTTAT
CTGAACTTGCTACTTTAATTGGTGATTTAAATTTTGTTTTTAATGCTGATTTTTTCAATATTGGTACTGATTTTGAATGT
GGAGATTTGGGTATTATAAAAAAGAATACAGAAAAAGAAAAAAATTTGATTAGTATTGATGTTAAAAATTTTAAGAAGAA
TAGTGGTGTTAAGGAATTTTTGAATACAAATTCTAGATTTAGATTAGTTGATAATGATAGTTCTGTTGGGAAATATGCTT
TAAAGGAAACATTTGATGGTTCTAGCGAATTTATGGATAATCTATCTGGATCTAGTGTAAAAAATATAAAAGAATTTTTT
TTAAGTCAAATTGATGATAATTTGATGTCAGAATGGAATTTGAAAGTTAATCGTAATATTGTGAATAAGGCTAAAATTGT
GTTAAAATCGAATGATACAGGAGAGATTAGGTTGATTTTAAAACCTAAAAAACTTGGTAGTATAAGAATTAATTTAAATC
TTGATTCTAATAATAATTTATTAGGAAAGATAATAGTTGATAATCATAATGTTAGGACTCTTTTTGAACAAAATATGTAT
TCACTCAATAAAATGTTAAGTGATAATGGTTTTAATACTAGTTTAAATCTTTCTCTTGCAGGTAGTGATTTGGGATTTTC
TTCTGGTAGTAATTTTAAGGATGATTTTGAGGGTCATCGACATTCTTTAAAGGAGAGTCAGGTTTTTAGAATTGAAGATT
ATGTTGAATTTTCTGGTGATTTAGAGGAAAATGTTAATTTAATTGTTTAA

Upstream 100 bases:

>100_bases
AGGACGAGCATCTATTGTGCCTTATTGGTTGTCTCTTATGGATTCTAAGAAGGCTGCTGTATTGATTAGAAAAATGTCTG
TTAGTGCATTGGAGTAATGT

Downstream 100 bases:

>100_bases
AATGGAGGATAGATGAATACAATTAGTAATATTGATAATTTAGTTAATATAGGGCAGTCTAAAAAAATAGTTAATGCTGG
ATTAAAAAGAGATAGGGATA

Product: flagellar protein

Products: NA

Alternate protein names: Flagellar Hook-Length Control Protein

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEK
FKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFEC
GDLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF
LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMY
SLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV

Sequences:

>Translated_389_residues
MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEK
FKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFEC
GDLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF
LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMY
SLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV
>Mature_388_residues
SNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEKF
KDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECG
DLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFFL
SQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMYS
LNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44114; Mature: 43983

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSN
CCCHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLINKSSKNLSLNHSFVLEKFKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFV
CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH
DRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECGDLGIIKKNTEKEKNLISID
HHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCCCCCCCEEEEECCCCCCCCEEEEE
VKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF
HHHCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNL
HHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCE
LGKIIVDNHNVRTLFEQNMYSLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHR
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH
HSLKESQVFRIEDYVEFSGDLEENVNLIV
HHHCCCCEEEEHHHHHCCCCCCCCCCEEC
>Mature Secondary Structure 
SNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSN
CCHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLINKSSKNLSLNHSFVLEKFKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFV
CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH
DRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECGDLGIIKKNTEKEKNLISID
HHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCCCCCCCEEEEECCCCCCCCEEEEE
VKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF
HHHCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNL
HHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCE
LGKIIVDNHNVRTLFEQNMYSLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHR
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH
HSLKESQVFRIEDYVEFSGDLEENVNLIV
HHHCCCCEEEEHHHHHCCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA