| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is flbC
Identifier: 203284206
GI number: 203284206
Start: 309434
End: 310603
Strand: Reverse
Name: flbC
Synonym: BDU_288
Alternate gene names: NA
Gene position: 310603-309434 (Counterclockwise)
Preceding gene: 203284207
Following gene: 203284205
Centisome position: 33.34
GC content: 24.02
Gene sequence:
>1170_bases ATGAGTAATTTAAGTAAAATTATTGATGTTAATTTATCAAAGTTAAATAAAAATTTTAATTTTATAAATGCTAGTTTATT AAGTCAAGATAAAAAGGGTGGTTTTGCAGATTTTATTTCTTCAGAAATTCAAAGTATGTCTAAATTAAGAATTTCATTGT TAGAGTTTTTAAAGAGTAATGGGCTTATAAATAAAAGTTCTAAAAATCTTTCTTTAAATCATTCTTTTGTGTTGGAAAAA TTTAAAGATAAAGATTTTATGTCTGACTTTAAATCCTTGCTTAAAGAAACAGGAAGTTTATTTGATTTTGAAAGTTTGAA AAATTTAAGAGAAAATTTATCTTTTGATTCTGAATTTGTTGATAGAAGAGAAATGTTAAGTAATGTTGAGAAGGTCTTAT CTGAACTTGCTACTTTAATTGGTGATTTAAATTTTGTTTTTAATGCTGATTTTTTCAATATTGGTACTGATTTTGAATGT GGAGATTTGGGTATTATAAAAAAGAATACAGAAAAAGAAAAAAATTTGATTAGTATTGATGTTAAAAATTTTAAGAAGAA TAGTGGTGTTAAGGAATTTTTGAATACAAATTCTAGATTTAGATTAGTTGATAATGATAGTTCTGTTGGGAAATATGCTT TAAAGGAAACATTTGATGGTTCTAGCGAATTTATGGATAATCTATCTGGATCTAGTGTAAAAAATATAAAAGAATTTTTT TTAAGTCAAATTGATGATAATTTGATGTCAGAATGGAATTTGAAAGTTAATCGTAATATTGTGAATAAGGCTAAAATTGT GTTAAAATCGAATGATACAGGAGAGATTAGGTTGATTTTAAAACCTAAAAAACTTGGTAGTATAAGAATTAATTTAAATC TTGATTCTAATAATAATTTATTAGGAAAGATAATAGTTGATAATCATAATGTTAGGACTCTTTTTGAACAAAATATGTAT TCACTCAATAAAATGTTAAGTGATAATGGTTTTAATACTAGTTTAAATCTTTCTCTTGCAGGTAGTGATTTGGGATTTTC TTCTGGTAGTAATTTTAAGGATGATTTTGAGGGTCATCGACATTCTTTAAAGGAGAGTCAGGTTTTTAGAATTGAAGATT ATGTTGAATTTTCTGGTGATTTAGAGGAAAATGTTAATTTAATTGTTTAA
Upstream 100 bases:
>100_bases AGGACGAGCATCTATTGTGCCTTATTGGTTGTCTCTTATGGATTCTAAGAAGGCTGCTGTATTGATTAGAAAAATGTCTG TTAGTGCATTGGAGTAATGT
Downstream 100 bases:
>100_bases AATGGAGGATAGATGAATACAATTAGTAATATTGATAATTTAGTTAATATAGGGCAGTCTAAAAAAATAGTTAATGCTGG ATTAAAAAGAGATAGGGATA
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEK FKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFEC GDLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMY SLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV
Sequences:
>Translated_389_residues MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEK FKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFEC GDLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMY SLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV >Mature_388_residues SNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSNGLINKSSKNLSLNHSFVLEKF KDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFVDRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECG DLGIIKKNTEKEKNLISIDVKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFFL SQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNLLGKIIVDNHNVRTLFEQNMYS LNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHRHSLKESQVFRIEDYVEFSGDLEENVNLIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44114; Mature: 43983
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSN CCCHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLINKSSKNLSLNHSFVLEKFKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFV CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH DRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECGDLGIIKKNTEKEKNLISID HHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCCCCCCCEEEEECCCCCCCCEEEEE VKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF HHHCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNL HHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCE LGKIIVDNHNVRTLFEQNMYSLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHR EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH HSLKESQVFRIEDYVEFSGDLEENVNLIV HHHCCCCEEEEHHHHHCCCCCCCCCCEEC >Mature Secondary Structure SNLSKIIDVNLSKLNKNFNFINASLLSQDKKGGFADFISSEIQSMSKLRISLLEFLKSN CCHHHHHHCCHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GLINKSSKNLSLNHSFVLEKFKDKDFMSDFKSLLKETGSLFDFESLKNLRENLSFDSEFV CCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH DRREMLSNVEKVLSELATLIGDLNFVFNADFFNIGTDFECGDLGIIKKNTEKEKNLISID HHHHHHHHHHHHHHHHHHHHHCCHHEEECCEEECCCCCCCCCEEEEECCCCCCCCEEEEE VKNFKKNSGVKEFLNTNSRFRLVDNDSSVGKYALKETFDGSSEFMDNLSGSSVKNIKEFF HHHCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH LSQIDDNLMSEWNLKVNRNIVNKAKIVLKSNDTGEIRLILKPKKLGSIRINLNLDSNNNL HHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCE LGKIIVDNHNVRTLFEQNMYSLNKMLSDNGFNTSLNLSLAGSDLGFSSGSNFKDDFEGHR EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHH HSLKESQVFRIEDYVEFSGDLEENVNLIV HHHCCCCEEEEHHHHHCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA