| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is gufA [H]
Identifier: 203284139
GI number: 203284139
Start: 234751
End: 235572
Strand: Reverse
Name: gufA [H]
Synonym: BDU_220
Alternate gene names: 203284139
Gene position: 235572-234751 (Counterclockwise)
Preceding gene: 203284140
Following gene: 203284134
Centisome position: 25.28
GC content: 34.79
Gene sequence:
>822_bases ATGTTTAAGCATTTGTGTGATTATTTATTAACTCTTCATCCTATTTTTTTAGGGTTTTTGGGTTCTGTTTTTACTTGGTT TACCACTGCTTTTGGAGCAGCTGCTGTTTTTTGTTTTAGGCGAGTCAATAATAAAATAATGGATGCTATGCTTGGATTTT CGGCAGGAATTATGATTGCTGCTAGTTTTTTTTCGCTTATTAAACCAGCAATAGAAATGGCAGAAGAGCTTGGTTATGTT ACGTGGATACCTGCAGTTTGTGGTTTTCTTTGTGGTGCATTTTTTATATATATTGTAGATGTATTTGTGCCAGACCTTGA AAAGTTAACATTTATTGATGAAGATTTAACCAGACATGGAAAGAAGGATTTTTTGCTTTTTACAGCTGTAACTTTGCATA ATTTTCCCGAAGGACTTGCTGTTGGTGTTGCTTTTGGTGCTCTAGCATCTTCTCCTGATCTGCATACTTTAGTTGGAGCT ATGATTCTTACATTGGGAATTGGTATTCAAAATATGCCAGAAGGTGCGGCTATTTCTTTGCCTTTAAGAAGAGGCCATGT TCCTTTATGGAAGTGTTTTAATTATGGACAAATGTCAGGATTGGTGGAAATTATTGGAGGCTTTTTGGGTTCTTATGCTG TTTATACTTTTACTAGAATTTTACCCTTTGCTTTATCCTTTTCTGCAGGTGCAATGATTTATGTCTCAATTGAACAATTA ATACCTGAGGCTAAAAGGAAAGATATTGATAATAAGATCCCGACCATATTTGGAGTTATTGGGTTTTCTTTAATGATGTT CCTTGATGTTTCTTTGGGTTAA
Upstream 100 bases:
>100_bases TGGCACTTTTAAGATACAAAAAGAACAAGCTTCTTCATCAGGAATAAGGAGAATAAGGGCAATTTTGATATGATAATAGA AAAATTATGGAGGATACTTT
Downstream 100 bases:
>100_bases TTTAACCAAATTTACCGGTGATATATTCTTCTGTTTTAATATTCTTAGGATTGAAGAATAATTCATCTGTTTTGCTTTCT TCTTCAATGTATCCATTTAA
Product: GufA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MFKHLCDYLLTLHPIFLGFLGSVFTWFTTAFGAAAVFCFRRVNNKIMDAMLGFSAGIMIAASFFSLIKPAIEMAEELGYV TWIPAVCGFLCGAFFIYIVDVFVPDLEKLTFIDEDLTRHGKKDFLLFTAVTLHNFPEGLAVGVAFGALASSPDLHTLVGA MILTLGIGIQNMPEGAAISLPLRRGHVPLWKCFNYGQMSGLVEIIGGFLGSYAVYTFTRILPFALSFSAGAMIYVSIEQL IPEAKRKDIDNKIPTIFGVIGFSLMMFLDVSLG
Sequences:
>Translated_273_residues MFKHLCDYLLTLHPIFLGFLGSVFTWFTTAFGAAAVFCFRRVNNKIMDAMLGFSAGIMIAASFFSLIKPAIEMAEELGYV TWIPAVCGFLCGAFFIYIVDVFVPDLEKLTFIDEDLTRHGKKDFLLFTAVTLHNFPEGLAVGVAFGALASSPDLHTLVGA MILTLGIGIQNMPEGAAISLPLRRGHVPLWKCFNYGQMSGLVEIIGGFLGSYAVYTFTRILPFALSFSAGAMIYVSIEQL IPEAKRKDIDNKIPTIFGVIGFSLMMFLDVSLG >Mature_273_residues MFKHLCDYLLTLHPIFLGFLGSVFTWFTTAFGAAAVFCFRRVNNKIMDAMLGFSAGIMIAASFFSLIKPAIEMAEELGYV TWIPAVCGFLCGAFFIYIVDVFVPDLEKLTFIDEDLTRHGKKDFLLFTAVTLHNFPEGLAVGVAFGALASSPDLHTLVGA MILTLGIGIQNMPEGAAISLPLRRGHVPLWKCFNYGQMSGLVEIIGGFLGSYAVYTFTRILPFALSFSAGAMIYVSIEQL IPEAKRKDIDNKIPTIFGVIGFSLMMFLDVSLG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=331, Percent_Identity=33.2326283987915, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI229577422, Length=336, Percent_Identity=32.4404761904762, Blast_Score=150, Evalue=1e-36, Organism=Escherichia coli, GI1789419, Length=248, Percent_Identity=26.6129032258064, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507805, Length=321, Percent_Identity=38.3177570093458, Blast_Score=190, Evalue=5e-49, Organism=Drosophila melanogaster, GI24652846, Length=177, Percent_Identity=44.6327683615819, Blast_Score=131, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 29918; Mature: 29918
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHLCDYLLTLHPIFLGFLGSVFTWFTTAFGAAAVFCFRRVNNKIMDAMLGFSAGIMIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFFSLIKPAIEMAEELGYVTWIPAVCGFLCGAFFIYIVDVFVPDLEKLTFIDEDLTRHG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC KKDFLLFTAVTLHNFPEGLAVGVAFGALASSPDLHTLVGAMILTLGIGIQNMPEGAAISL CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEC PLRRGHVPLWKCFNYGQMSGLVEIIGGFLGSYAVYTFTRILPFALSFSAGAMIYVSIEQL CHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH IPEAKRKDIDNKIPTIFGVIGFSLMMFLDVSLG CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKHLCDYLLTLHPIFLGFLGSVFTWFTTAFGAAAVFCFRRVNNKIMDAMLGFSAGIMIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASFFSLIKPAIEMAEELGYVTWIPAVCGFLCGAFFIYIVDVFVPDLEKLTFIDEDLTRHG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC KKDFLLFTAVTLHNFPEGLAVGVAFGALASSPDLHTLVGAMILTLGIGIQNMPEGAAISL CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEC PLRRGHVPLWKCFNYGQMSGLVEIIGGFLGSYAVYTFTRILPFALSFSAGAMIYVSIEQL CHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH IPEAKRKDIDNKIPTIFGVIGFSLMMFLDVSLG CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]