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The map label for this gene is efp

Identifier: 203284134

GI number: 203284134

Start: 229904

End: 230482

Strand: Reverse

Name: efp

Synonym: BDU_215

Alternate gene names: 203284134

Gene position: 230482-229904 (Counterclockwise)

Preceding gene: 203284139

Following gene: 203284133

Centisome position: 24.74

GC content: 30.22

Gene sequence:

>579_bases
ATGAGTACAATTAAATCCGGAGATATTGATAAAGGTTCTTTTTTGCTATTTAAGGGTATGCCACATATTGTTCTTGAGCG
TGAATTTTCAAAAATGGGTAGGGGAGGTTCCATTGTAAGATTAAAACTTAAAAATCTTAAAAATAAATCTGTTATTAAGG
AAACTTTAAAAGGATCTGATACGGTGGAGGAAATTGAAGTGTTAGAGGTTAATTCTCAATATCTTTATAAAGATAATGAG
AGTCTTATTTTTATGGATTTAGAGACATATGATCAATTTAGTGTTAATTTAAGAGATGTTGTAAATCTTGAAGATAAGGT
TTTATTTTTGCAAGAAGCCGAGGTTTATTCTCTTATTAAGTGGGGTAATGAAGTTATTGATTTGAAGTTGCCACCAAAGG
TTGCATTTGAAGTTATAGATGCTGAGATTGCTGTTAAGGGAGATACTGTTACTAATGCTATGAAAAATGTTACTTTGCAT
ACAGGTTTGGTAGTAAAGGCACCTCTTTTTATTAATATTGGGGATAAAATTTTAGTTAATTCTGAAACCAAAGAATATGC
TGAGAGAGTTAAAGTTTAA

Upstream 100 bases:

>100_bases
ACTATATATAATATCATTAATCTTAGATAAGTCAATGAATAGTAAATATTTTGATTTTTTGATATAAGTTATTATACACA
TTAGAAATTTGAGGTATTAG

Downstream 100 bases:

>100_bases
TATAGTATTATTTTTTTTAATAATTTTTTGTTCTTGTGAGATGAACTATCCTGAGATCAGGGAAGTTGATTATGTAATTA
ATTATTATTTTAATAAAGAT

Product: elongation factor EF-P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSTIKSGDIDKGSFLLFKGMPHIVLEREFSKMGRGGSIVRLKLKNLKNKSVIKETLKGSDTVEEIEVLEVNSQYLYKDNE
SLIFMDLETYDQFSVNLRDVVNLEDKVLFLQEAEVYSLIKWGNEVIDLKLPPKVAFEVIDAEIAVKGDTVTNAMKNVTLH
TGLVVKAPLFINIGDKILVNSETKEYAERVKV

Sequences:

>Translated_192_residues
MSTIKSGDIDKGSFLLFKGMPHIVLEREFSKMGRGGSIVRLKLKNLKNKSVIKETLKGSDTVEEIEVLEVNSQYLYKDNE
SLIFMDLETYDQFSVNLRDVVNLEDKVLFLQEAEVYSLIKWGNEVIDLKLPPKVAFEVIDAEIAVKGDTVTNAMKNVTLH
TGLVVKAPLFINIGDKILVNSETKEYAERVKV
>Mature_191_residues
STIKSGDIDKGSFLLFKGMPHIVLEREFSKMGRGGSIVRLKLKNLKNKSVIKETLKGSDTVEEIEVLEVNSQYLYKDNES
LIFMDLETYDQFSVNLRDVVNLEDKVLFLQEAEVYSLIKWGNEVIDLKLPPKVAFEVIDAEIAVKGDTVTNAMKNVTLHT
GLVVKAPLFINIGDKILVNSETKEYAERVKV

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=191, Percent_Identity=35.0785340314136, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI87082061, Length=190, Percent_Identity=25.2631578947368, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_BORDL (B5RL39)

Other databases:

- EMBL:   CP000976
- RefSeq:   YP_002221874.1
- EnsemblBacteria:   EBBORT00000000872
- GeneID:   6918299
- GenomeReviews:   CP000976_GR
- KEGG:   bdu:BDU_215
- GeneTree:   EBGT00050000006953
- HOGENOM:   HBG303311
- OMA:   MISSNDF
- ProtClustDB:   PRK00529
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 21668; Mature: 21537

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIKSGDIDKGSFLLFKGMPHIVLEREFSKMGRGGSIVRLKLKNLKNKSVIKETLKGSD
CCCCCCCCCCCCCEEEECCCCCEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
TVEEIEVLEVNSQYLYKDNESLIFMDLETYDQFSVNLRDVVNLEDKVLFLQEAEVYSLIK
CHHEEEEEEECCEEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHH
WGNEVIDLKLPPKVAFEVIDAEIAVKGDTVTNAMKNVTLHTGLVVKAPLFINIGDKILVN
CCCEEEEEECCHHHEEEEECEEEEEECCHHHHHHHCEEEECCEEEECCEEEECCCEEEEE
SETKEYAERVKV
CCHHHHHHHCCC
>Mature Secondary Structure 
STIKSGDIDKGSFLLFKGMPHIVLEREFSKMGRGGSIVRLKLKNLKNKSVIKETLKGSD
CCCCCCCCCCCCEEEECCCCCEEEEHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
TVEEIEVLEVNSQYLYKDNESLIFMDLETYDQFSVNLRDVVNLEDKVLFLQEAEVYSLIK
CHHEEEEEEECCEEEEECCCCEEEEEECCCCCCCCCHHHHCCCCCEEEEEEHHHHHHHHH
WGNEVIDLKLPPKVAFEVIDAEIAVKGDTVTNAMKNVTLHTGLVVKAPLFINIGDKILVN
CCCEEEEEECCHHHEEEEECEEEEEECCHHHHHHHCEEEECCEEEECCEEEECCCEEEEE
SETKEYAERVKV
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA