| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284133
Identifier: 203284133
GI number: 203284133
Start: 229273
End: 229926
Strand: Reverse
Name: 203284133
Synonym: BDU_214
Alternate gene names: NA
Gene position: 229926-229273 (Counterclockwise)
Preceding gene: 203284134
Following gene: 203284126
Centisome position: 24.68
GC content: 23.39
Gene sequence:
>654_bases ATGCTGAGAGAGTTAAAGTTTAATATAGTATTATTTTTTTTAATAATTTTTTGTTCTTGTGAGATGAACTATCCTGAGAT CAGGGAAGTTGATTATGTAATTAATTATTATTTTAATAAAGATAAGTTTGATTATTTTATGACTTTTGATTTTGCTGTTA AAGTTTTAAATGCTGGTACTCTGAATAAGTTTATTATTGAAAACATGGATAGTAGAGAATTTATAGAAGTAGTTAAAGAT AAATATTCATCTTCTTTTGTTAATTCTATTCTTGGACAGGATGTTCTTTATTGTAAAGACTTAAGATTTAATTTTGCTGA TAAAACTTTTGATAGTTTCGTGGCAAAGGTTCATCTTATTGATTCTGGAATGAGAGTATATAGCAAGGATGTTATTATAA GTTTAAATTTGTCAAATGAAGAATTGGCCTCAATTTATGATCATGTATATAAGTCAAAAGATGTAGAAAAGTTAAATGAA ATTAGTAGTAATAATTTATTTTTAATTAAAACCTCCAAAGATGAAATTAATTTTTTATATTCAATTGTTAAGATTAATGA CTTAATGAATATCCAGATGGATGATAATCTTGATACTTATATAGGATTTTATCATATGGGTAAGTATTCTAATCTATTTT TTAAACTAAACTAA
Upstream 100 bases:
>100_bases GCTATGAAAAATGTTACTTTGCATACAGGTTTGGTAGTAAAGGCACCTCTTTTTATTAATATTGGGGATAAAATTTTAGT TAATTCTGAAACCAAAGAAT
Downstream 100 bases:
>100_bases TTTGGGCCCACCAGGACTTGAACCTGGGACCACCCGATTATGAGTCGGGTGCTCTAACCAACTGAGCTATAGGCCCCATA AGCTTTATACGCATAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLRELKFNIVLFFLIIFCSCEMNYPEIREVDYVINYYFNKDKFDYFMTFDFAVKVLNAGTLNKFIIENMDSREFIEVVKD KYSSSFVNSILGQDVLYCKDLRFNFADKTFDSFVAKVHLIDSGMRVYSKDVIISLNLSNEELASIYDHVYKSKDVEKLNE ISSNNLFLIKTSKDEINFLYSIVKINDLMNIQMDDNLDTYIGFYHMGKYSNLFFKLN
Sequences:
>Translated_217_residues MLRELKFNIVLFFLIIFCSCEMNYPEIREVDYVINYYFNKDKFDYFMTFDFAVKVLNAGTLNKFIIENMDSREFIEVVKD KYSSSFVNSILGQDVLYCKDLRFNFADKTFDSFVAKVHLIDSGMRVYSKDVIISLNLSNEELASIYDHVYKSKDVEKLNE ISSNNLFLIKTSKDEINFLYSIVKINDLMNIQMDDNLDTYIGFYHMGKYSNLFFKLN >Mature_217_residues MLRELKFNIVLFFLIIFCSCEMNYPEIREVDYVINYYFNKDKFDYFMTFDFAVKVLNAGTLNKFIIENMDSREFIEVVKD KYSSSFVNSILGQDVLYCKDLRFNFADKTFDSFVAKVHLIDSGMRVYSKDVIISLNLSNEELASIYDHVYKSKDVEKLNE ISSNNLFLIKTSKDEINFLYSIVKINDLMNIQMDDNLDTYIGFYHMGKYSNLFFKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25691; Mature: 25691
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRELKFNIVLFFLIIFCSCEMNYPEIREVDYVINYYFNKDKFDYFMTFDFAVKVLNAGT CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEECCCCEEEEEEHHHHHHHHCCCC LNKFIIENMDSREFIEVVKDKYSSSFVNSILGQDVLYCKDLRFNFADKTFDSFVAKVHLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHEE DSGMRVYSKDVIISLNLSNEELASIYDHVYKSKDVEKLNEISSNNLFLIKTSKDEINFLY CCCCEEEECEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCHHHHHHH SIVKINDLMNIQMDDNLDTYIGFYHMGKYSNLFFKLN HHHHHHHHEEEEECCCCCCEEHEEECCCCCCEEEEEC >Mature Secondary Structure MLRELKFNIVLFFLIIFCSCEMNYPEIREVDYVINYYFNKDKFDYFMTFDFAVKVLNAGT CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEECCCCEEEEEEHHHHHHHHCCCC LNKFIIENMDSREFIEVVKDKYSSSFVNSILGQDVLYCKDLRFNFADKTFDSFVAKVHLI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHEE DSGMRVYSKDVIISLNLSNEELASIYDHVYKSKDVEKLNEISSNNLFLIKTSKDEINFLY CCCCEEEECEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCHHHHHHH SIVKINDLMNIQMDDNLDTYIGFYHMGKYSNLFFKLN HHHHHHHHEEEEECCCCCCEEHEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA