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The map label for this gene is yhjL [C]

Identifier: 203284115

GI number: 203284115

Start: 202463

End: 203605

Strand: Reverse

Name: yhjL [C]

Synonym: BDU_193

Alternate gene names: 203284115

Gene position: 203605-202463 (Counterclockwise)

Preceding gene: 203284120

Following gene: 203284114

Centisome position: 21.85

GC content: 28.7

Gene sequence:

>1143_bases
ATGTTAGACAATAAACTTTTAGATGATTTTGAAGATATCTCGCAAAATTCTGATAAAGAGCTTCTTGATGTTACTGAAAA
ATCCAAAAGAGGTTATCAGTTAATAAAGGAAGAGAGACTTTTTGAAGCAGAATCATTGTTTAATGATATCTTACAAAAGG
ATGATGATAATAATTATGCTCTTGTTGGACTTGGAGACATTGAAAGAAAGAAGCGTAACTTTGATAAAGCTATAATTTAT
TATCAAAAATGCCTTGCCAAACATTCAAATAATAATTATGCTCTTTTTGGGTTGGGAGATTGTTATAGAAGTTTGGGAGA
TTATAAGAAGGCCACAGACGTATGGGAAGAATATTTAAAATATGATTCTGAAAATATTACGGTTCTTACAAGAGTTGCGT
CTTCTTATAGAAAATTAAAAAATTTTCAAAAATCAAGACAATCATATTTAAGAGTCTTAGAGCTTGTACCTGATAATGAT
TATGCACTTGTGGGTATTGGACATTTGTATTATGACTTTAAAGAATATAAAGAAGCTTTGAAATATTGGCTTAAGATGTA
TGAAATAAATCAAGTTAAGATAGATGTTCGTGTATTAACTTCAATTGGAAATTGTTATAGAAAATTGAAAGAATTTGGTA
AAGGCATTTATTTTTTTAAGAGAGCTTTGGAAATTTCTCCAAATAACTTTTATGCTATTTTTGGACTTGCTGATTGCTAT
AGAGGAAGCAAAGAGTATGCTGAGGCTTTAAAATATTGGCTTACAATCATAGATAGAGATCCAAAAAATAATTTAGTTTT
AACAAGGGTGGGGGATACATATAGATATTTGAAAGATTATGAAAATGCACAAATTTATTATAAGAAAGCACTTGATGTTG
ATTTTGATATGTTTGCTATACTTGGTCTTGCATTACTTCAAAAAGAACAGGGGCAATATGAAGAAGCATTGATAGCTATT
AAGAATTTAATAAAAACTAATCCTAAAAATTCAATATTGTATGTAAATGTTGCTGAATGTTATGAAGCTTTAGGTCAGAT
TGAAGATGCTATTGATATTTTATCGAGTTTCTTGCAACTTGGCATGAAGAATGTTACCATTATTGACTATATTACTAATC
TTAAAAAAAAGATGGATGCATGA

Upstream 100 bases:

>100_bases
CTTGGTATGTTTATATAGTAAATAAGTTATATGTTTTTTAAGTAGTAGTATATATGAAATATGTTATGTCTTTAATAAAC
CAGTTAAGAAGGGGTTATTT

Downstream 100 bases:

>100_bases
AAGTTGATTTTAATAGAGCTATTTTTTTAGAAAAATTAATAGATACTCATGTTCATTTTAATGAAATGAAGAAACATTCT
GTAGACATTCATTATGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; Peptidase; O-Linked GLCNAC Transferase; TPR Domain Containing Protein; Tetratricopeptide Domain-Containing Protein; O-Linked Glcnac Transferase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR-Repeat-Containing Protein; TPR Domain Protein; Prenyltransferase; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; O-Antigen N-Acetylglucosamine Transferase; TPR Repeat-Containing Methyltransferase; O-Antigen GlcNac Transferase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLDNKLLDDFEDISQNSDKELLDVTEKSKRGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAIIY
YQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDND
YALVGIGHLYYDFKEYKEALKYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEISPNNFYAIFGLADCY
RGSKEYAEALKYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDVDFDMFAILGLALLQKEQGQYEEALIAI
KNLIKTNPKNSILYVNVAECYEALGQIEDAIDILSSFLQLGMKNVTIIDYITNLKKKMDA

Sequences:

>Translated_380_residues
MLDNKLLDDFEDISQNSDKELLDVTEKSKRGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAIIY
YQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDND
YALVGIGHLYYDFKEYKEALKYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEISPNNFYAIFGLADCY
RGSKEYAEALKYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDVDFDMFAILGLALLQKEQGQYEEALIAI
KNLIKTNPKNSILYVNVAECYEALGQIEDAIDILSSFLQLGMKNVTIIDYITNLKKKMDA
>Mature_380_residues
MLDNKLLDDFEDISQNSDKELLDVTEKSKRGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAIIY
YQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDND
YALVGIGHLYYDFKEYKEALKYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEISPNNFYAIFGLADCY
RGSKEYAEALKYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDVDFDMFAILGLALLQKEQGQYEEALIAI
KNLIKTNPKNSILYVNVAECYEALGQIEDAIDILSSFLQLGMKNVTIIDYITNLKKKMDA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24659892, Length=191, Percent_Identity=25.6544502617801, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44522; Mature: 44522

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNKLLDDFEDISQNSDKELLDVTEKSKRGYQLIKEERLFEAESLFNDILQKDDDNNYA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVGLGDIERKKRNFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYLK
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
YDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKEYKEAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
KYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEISPNNFYAIFGLADCY
HHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEEEEEEHHHHH
RGSKEYAEALKYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDVDFDMFAI
CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECCCCCHHHHHH
LGLALLQKEQGQYEEALIAIKNLIKTNPKNSILYVNVAECYEALGQIEDAIDILSSFLQL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
GMKNVTIIDYITNLKKKMDA
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDNKLLDDFEDISQNSDKELLDVTEKSKRGYQLIKEERLFEAESLFNDILQKDDDNNYA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVGLGDIERKKRNFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYLK
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
YDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKEYKEAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
KYWLKMYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRALEISPNNFYAIFGLADCY
HHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCEEEEEEHHHHH
RGSKEYAEALKYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDVDFDMFAI
CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECCCCCHHHHHH
LGLALLQKEQGQYEEALIAIKNLIKTNPKNSILYVNVAECYEALGQIEDAIDILSSFLQL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
GMKNVTIIDYITNLKKKMDA
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA