| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284059
Identifier: 203284059
GI number: 203284059
Start: 142201
End: 143145
Strand: Reverse
Name: 203284059
Synonym: BDU_137
Alternate gene names: NA
Gene position: 143145-142201 (Counterclockwise)
Preceding gene: 203284061
Following gene: 203284058
Centisome position: 15.36
GC content: 28.36
Gene sequence:
>945_bases GTGTCATCAGAAAAAATCGCGGAATTAATCAAAGATATTTATTTAAGTTTCAAAAAAGGTGATTTTAAAACAGCTTTGAT GAAATCAGAAGAAGCGCATTCTCTTGATTTTGACAATGTTGAAATTTTGACGGCTTTAAAGAGTTCTGTATATTGGAATG GTCAAATTGAAAGTCTTGATAGAATAGATAAGGATTATGAAAAGGCCGAATTTTTAACAAGAGAATGGAATAATTTTGCT AGAAGATATTTAAAAAAAATGAATTTTGATTTTATTCAAGGGCGTAACTCAATTAAGTATTTTGTATTTCAGTTATGTTT GAATATATATCAAAATATATATAGGTTACAACCAGAAAATCTAGACATTTTAATAAAGATTGCTAAGTCTTATAAAGGAA TGGGTAATTATGAGAGAGCTATAGCTGTTTTTTTACAAATATTGGGAGATGCAAAGGATAATGCAGATGTGGTTGCTGAG CTTGCTGATTCTTATGCTCTTATTGATGAGATTAAAGAAGCCAAGGTATTGTTTAGAGAAGCTTTTTTTATTAATCCTCA AAAGATCGATATAGATGCGCTTGAATCTGAAATGATACTTAAATTAGTAGAAGCTATTAAGAGTGATAGAAATATTTCTG ATACTCTTATTAAAGAGTGGATACCTGTTTATGGTGCACTTAATGGTGTTTTTAATATAAAAAGAGAATTGAGGCCTATT GAGCTTGGTCATTTAAAGCAATCTGTTTATAGTTTGCGTAATGAACTTAAAGAAAAGTCTTATAGATCAATAAATGAGAG CATATTGCTTCCAAGGCTTATTAATAAATATTTTTGGCTTATTGATCATTATGTAAGGATAAAAGAAGATCGTGTTAGAA TCGATGAAATTTTATCTTATATTAAAGAAATAGATATAGGAATATATCAGCAATATGTCAATTAG
Upstream 100 bases:
>100_bases TTGTTTTGTTTTAAATGGATGTTAGTTTGACTAAAAATTTATTAATGTTATAATTATATAAGTCGTTTGGGATTTATACA TATTGTAAAGTGGTAGGAAT
Downstream 100 bases:
>100_bases ATTGGTTTTAATAAAATTGATATTAGGAGAGTTGAATGTCTAATATTACTATAGAAAGATTAGATAATATCTTGCAAGAG GATAAATGGACAAGAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSSEKIAELIKDIYLSFKKGDFKTALMKSEEAHSLDFDNVEILTALKSSVYWNGQIESLDRIDKDYEKAEFLTREWNNFA RRYLKKMNFDFIQGRNSIKYFVFQLCLNIYQNIYRLQPENLDILIKIAKSYKGMGNYERAIAVFLQILGDAKDNADVVAE LADSYALIDEIKEAKVLFREAFFINPQKIDIDALESEMILKLVEAIKSDRNISDTLIKEWIPVYGALNGVFNIKRELRPI ELGHLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHYVRIKEDRVRIDEILSYIKEIDIGIYQQYVN
Sequences:
>Translated_314_residues MSSEKIAELIKDIYLSFKKGDFKTALMKSEEAHSLDFDNVEILTALKSSVYWNGQIESLDRIDKDYEKAEFLTREWNNFA RRYLKKMNFDFIQGRNSIKYFVFQLCLNIYQNIYRLQPENLDILIKIAKSYKGMGNYERAIAVFLQILGDAKDNADVVAE LADSYALIDEIKEAKVLFREAFFINPQKIDIDALESEMILKLVEAIKSDRNISDTLIKEWIPVYGALNGVFNIKRELRPI ELGHLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHYVRIKEDRVRIDEILSYIKEIDIGIYQQYVN >Mature_313_residues SSEKIAELIKDIYLSFKKGDFKTALMKSEEAHSLDFDNVEILTALKSSVYWNGQIESLDRIDKDYEKAEFLTREWNNFAR RYLKKMNFDFIQGRNSIKYFVFQLCLNIYQNIYRLQPENLDILIKIAKSYKGMGNYERAIAVFLQILGDAKDNADVVAEL ADSYALIDEIKEAKVLFREAFFINPQKIDIDALESEMILKLVEAIKSDRNISDTLIKEWIPVYGALNGVFNIKRELRPIE LGHLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHYVRIKEDRVRIDEILSYIKEIDIGIYQQYVN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37006; Mature: 36875
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEKIAELIKDIYLSFKKGDFKTALMKSEEAHSLDFDNVEILTALKSSVYWNGQIESLD CCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH RIDKDYEKAEFLTREWNNFARRYLKKMNFDFIQGRNSIKYFVFQLCLNIYQNIYRLQPEN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LDILIKIAKSYKGMGNYERAIAVFLQILGDAKDNADVVAELADSYALIDEIKEAKVLFRE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFFINPQKIDIDALESEMILKLVEAIKSDRNISDTLIKEWIPVYGALNGVFNIKRELRPI HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELGHLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHYVRIKEDRVRIDEILSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKEIDIGIYQQYVN HHHHHHHHHHHHCC >Mature Secondary Structure SSEKIAELIKDIYLSFKKGDFKTALMKSEEAHSLDFDNVEILTALKSSVYWNGQIESLD CHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH RIDKDYEKAEFLTREWNNFARRYLKKMNFDFIQGRNSIKYFVFQLCLNIYQNIYRLQPEN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LDILIKIAKSYKGMGNYERAIAVFLQILGDAKDNADVVAELADSYALIDEIKEAKVLFRE HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFFINPQKIDIDALESEMILKLVEAIKSDRNISDTLIKEWIPVYGALNGVFNIKRELRPI HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELGHLKQSVYSLRNELKEKSYRSINESILLPRLINKYFWLIDHYVRIKEDRVRIDEILSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKEIDIGIYQQYVN HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA