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The map label for this gene is recA

Identifier: 203284057

GI number: 203284057

Start: 138361

End: 139452

Strand: Reverse

Name: recA

Synonym: BDU_135

Alternate gene names: 203284057

Gene position: 139452-138361 (Counterclockwise)

Preceding gene: 203284058

Following gene: 203284056

Centisome position: 14.97

GC content: 34.34

Gene sequence:

>1092_bases
ATGTCAAAATTAAAAGATCCAATGGATGATTCTTTGAAAAATAAATTGAACAAAGAAAAAGCCATTGAACTTGCTAGAGT
GCAAATAGAGAAGGATTTTGGAAAAGGAAGTCTTATTAAAATGGGAGAATCTCCTGTAGGAAAATATTTAGAGAGCATAC
CTAGTGGTTCTATTTTGCTTGATGAGGCAATTGGTATTGGTGGGTATCCTAGAGGCAGAGTAGTGGAAATTTTTGGTCCT
GAGTCTTCTGGTAAAACTACTTTAACTCTTCAAGCAATTGCTGAGATTCAAAAGACAGGTGGAATTGCGGCTTTTATTGA
TGCTGAACATGCTCTTGATCCTGTTTATGCAAGGGCCTTGGGTGTTAATATTAATGAACTTTGGCTTAGTCAACCTGATA
CAGGAGAACAAGCCCTTGATATTGCTGAATATTTAATTAGGAGTGGTGGAGTTGATTTAATTGTTGTTGATTCTGTTGCG
GCTTTGACGCCACAAGCAGAAATTGATGGCGAGATGGGTGATACTCAAATTGGACTTCAAGCAAGACTTATGAGTAAGGC
TTTAAGGAAAATTACAGCCATACTTTCAAAATCTAATACTTGTATTATGTTTATTAATCAAATAAGAATGAAAATTGGTT
TAGTCTTTGGTAGTCCAGAGACTACTACTGGAGGAAATGCTTTGAAATTTTATTCTTCCCTTCGTCTTGAAGTTAGAAAG
GTTGAGCAAGTTATAGGCAGTTCTTCAGATAATGTTATTGGTAACAAGATAAGAGTTAAGGTTGTTAAAAATAAAGTGGC
ACCTCCTTTTCGTAAAGCCGAACTTATAGTTTATTTTGGTAAAGGTATTTCGCGTGAGGCGAGTATATTAGATGCTGCTA
TTAAATATAATTTGGTTCAAAAATCAGGTTCTTGGTATGCTATGGGAGATGATAACTTAGGACAAGGTAGAGAAAATGTT
ATTGAGTATCTTTTTAAGGAAAAAGCCCTTGCAAATGAACTTGAAAATAAACTTAGAAAAATAATATTTGAAAGTCCTAG
TCAAGATTCTCTTACAGTTGATATTTCTAAGAGTGAGGAAAATAAAGAATAA

Upstream 100 bases:

>100_bases
TCTCGGGAAGGTGATAGTCTTGATTTTGTTATAAATGATACTCATTTTCAATATTATGTTAAGAAGATAGAGCCTGCCAA
AATTAATTGAGAGAGATAAG

Downstream 100 bases:

>100_bases
AATAAGAAATGATGAATTTAGATAATTATTTGATTGTTTGTAATGATTTTAAAGGAGAAATAGGGGTCTTTTTTGATTAC
ATAAGAAATAAAAGAGAAAT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSKLKDPMDDSLKNKLNKEKAIELARVQIEKDFGKGSLIKMGESPVGKYLESIPSGSILLDEAIGIGGYPRGRVVEIFGP
ESSGKTTLTLQAIAEIQKTGGIAAFIDAEHALDPVYARALGVNINELWLSQPDTGEQALDIAEYLIRSGGVDLIVVDSVA
ALTPQAEIDGEMGDTQIGLQARLMSKALRKITAILSKSNTCIMFINQIRMKIGLVFGSPETTTGGNALKFYSSLRLEVRK
VEQVIGSSSDNVIGNKIRVKVVKNKVAPPFRKAELIVYFGKGISREASILDAAIKYNLVQKSGSWYAMGDDNLGQGRENV
IEYLFKEKALANELENKLRKIIFESPSQDSLTVDISKSEENKE

Sequences:

>Translated_363_residues
MSKLKDPMDDSLKNKLNKEKAIELARVQIEKDFGKGSLIKMGESPVGKYLESIPSGSILLDEAIGIGGYPRGRVVEIFGP
ESSGKTTLTLQAIAEIQKTGGIAAFIDAEHALDPVYARALGVNINELWLSQPDTGEQALDIAEYLIRSGGVDLIVVDSVA
ALTPQAEIDGEMGDTQIGLQARLMSKALRKITAILSKSNTCIMFINQIRMKIGLVFGSPETTTGGNALKFYSSLRLEVRK
VEQVIGSSSDNVIGNKIRVKVVKNKVAPPFRKAELIVYFGKGISREASILDAAIKYNLVQKSGSWYAMGDDNLGQGRENV
IEYLFKEKALANELENKLRKIIFESPSQDSLTVDISKSEENKE
>Mature_362_residues
SKLKDPMDDSLKNKLNKEKAIELARVQIEKDFGKGSLIKMGESPVGKYLESIPSGSILLDEAIGIGGYPRGRVVEIFGPE
SSGKTTLTLQAIAEIQKTGGIAAFIDAEHALDPVYARALGVNINELWLSQPDTGEQALDIAEYLIRSGGVDLIVVDSVAA
LTPQAEIDGEMGDTQIGLQARLMSKALRKITAILSKSNTCIMFINQIRMKIGLVFGSPETTTGGNALKFYSSLRLEVRKV
EQVIGSSSDNVIGNKIRVKVVKNKVAPPFRKAELIVYFGKGISREASILDAAIKYNLVQKSGSWYAMGDDNLGQGRENVI
EYLFKEKALANELENKLRKIIFESPSQDSLTVDISKSEENKE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=342, Percent_Identity=54.6783625730994, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_BORDL (B5RLK6)

Other databases:

- EMBL:   CP000976
- RefSeq:   YP_002221797.1
- EnsemblBacteria:   EBBORT00000001637
- GeneID:   6918219
- GenomeReviews:   CP000976_GR
- KEGG:   bdu:BDU_135
- GeneTree:   EBGT00050000007310
- HOGENOM:   HBG339889
- OMA:   AISKSRA
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 39597; Mature: 39466

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKDPMDDSLKNKLNKEKAIELARVQIEKDFGKGSLIKMGESPVGKYLESIPSGSILL
CCCCCCCCHHHHHHHHCHHHHHHHHHHEEECCCCCCCEEECCCCHHHHHHHHCCCCCEEE
DEAIGIGGYPRGRVVEIFGPESSGKTTLTLQAIAEIQKTGGIAAFIDAEHALDPVYARAL
ECCCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHHCCHHHHHHH
GVNINELWLSQPDTGEQALDIAEYLIRSGGVDLIVVDSVAALTPQAEIDGEMGDTQIGLQ
CCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCHHHHH
ARLMSKALRKITAILSKSNTCIMFINQIRMKIGLVFGSPETTTGGNALKFYSSLRLEVRK
HHHHHHHHHHHHHHHCCCCCEEEEHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
VEQVIGSSSDNVIGNKIRVKVVKNKVAPPFRKAELIVYFGKGISREASILDAAIKYNLVQ
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEE
KSGSWYAMGDDNLGQGRENVIEYLFKEKALANELENKLRKIIFESPSQDSLTVDISKSEE
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
NKE
CCC
>Mature Secondary Structure 
SKLKDPMDDSLKNKLNKEKAIELARVQIEKDFGKGSLIKMGESPVGKYLESIPSGSILL
CCCCCCCHHHHHHHHCHHHHHHHHHHEEECCCCCCCEEECCCCHHHHHHHHCCCCCEEE
DEAIGIGGYPRGRVVEIFGPESSGKTTLTLQAIAEIQKTGGIAAFIDAEHALDPVYARAL
ECCCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEECHHHCCHHHHHHH
GVNINELWLSQPDTGEQALDIAEYLIRSGGVDLIVVDSVAALTPQAEIDGEMGDTQIGLQ
CCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCHHHHH
ARLMSKALRKITAILSKSNTCIMFINQIRMKIGLVFGSPETTTGGNALKFYSSLRLEVRK
HHHHHHHHHHHHHHHCCCCCEEEEHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
VEQVIGSSSDNVIGNKIRVKVVKNKVAPPFRKAELIVYFGKGISREASILDAAIKYNLVQ
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHEE
KSGSWYAMGDDNLGQGRENVIEYLFKEKALANELENKLRKIIFESPSQDSLTVDISKSEE
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
NKE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA