Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is cdsA [H]

Identifier: 203284044

GI number: 203284044

Start: 128463

End: 129428

Strand: Reverse

Name: cdsA [H]

Synonym: BDU_122

Alternate gene names: 203284044

Gene position: 129428-128463 (Counterclockwise)

Preceding gene: 203284045

Following gene: 203284043

Centisome position: 13.89

GC content: 26.71

Gene sequence:

>966_bases
TTGCTTATTGTGAATTTATTTTTTCAAATGTTTTATGGCCAGATTATTTTGTTTTTCATTATGAGAGAGATTTGGAATGT
TTTAAGAATAGGAAGAGAAACTTTGGGAGATAAAGGTTTATTTAGTATTAGGTCTAAAAAGTTGACATTTGTTGCTAGAC
TTGGAACATTTTTATTTTTTGTTCCTTTGGTCTTGCTTTTAATATTTTTAGAGTTTAAGAGTTATTTATTCATTAATATT
TTAATTTTTATGTTTAGTGGAATTGCTGCAAAAGAAGTTAATGATTTGCTTAAATTTAAGTCTGCTTCTGTTTCTAGTAC
TTTATCTTTCTTTTTAGGAATATTCCCTCCAATTTTGACATATGTGCATTTTAATATTTTAGATTTAGGCATTAATATAG
TATTTTATTTAGTTATAACTTTGGTTTTTAGTAACTGGATTGTCAATTTGGTTTTTATTAAAGAAAATGAAATTGTTAAT
TTTTTATCACAAGCAACTTCTATAATTTTTATACTCATATATCCAGGTATTTTGATGTCATTTGTTGTTGCTATTACTAC
TTTGCCAAAAGCACCTATTCTTTTATTAATACTTTTTTCTATGGTTAGTGGTAATGATACTTTTGCTTATCTTTTTGGAT
ATTTCTTTGGAAAAAATAGTTATAAGCCCACTATTATTAGTCCTAATAAGACTATAATGGGATTTTTTGGTGGTATACTA
TTTTCTGTCATTGTTGTACTTATTGTAGTAAGCTTAGGATTGATAAATTTAACTTATGGAGAGGCTATGGTTTTTGGAGT
TTTAATAGGATTTTTTACTATTATTGGTGATTTGTTTGAATCTGGACTTAAGCGTAGTGCAGGAGTTAAAGATTCTGGTA
AAATTATTCCTGGTAGAGGTGGTGCTCTTGATTCAATTGATTCATATCTCTTAACAGGTCCTATATTTTATTTATATTTG
TCGTAG

Upstream 100 bases:

>100_bases
GAATTTGCTAAGTTTTTAGATAATCAAGAACTTGGTGATCTTGATCTCTTAATTCGAACAGGTGGAGATATGAGAGTAAG
TAATTTTCTTTTATGGAGAC

Downstream 100 bases:

>100_bases
TTTTGGGGAGTCATTAATGTATATTTTTTTTAGTATTTTAGCTTTCACTTTTATAATATTCATTCATGAGTTGGGGCATT
TATTTTTTGCAAGACTTTTT

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI
LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN
FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL
FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL
S

Sequences:

>Translated_321_residues
MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI
LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN
FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL
FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL
S
>Mature_321_residues
MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFFVPLVLLLIFLEFKSYLFINI
LIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILTYVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVN
FLSQATSIIFILIYPGILMSFVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL
FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRGGALDSIDSYLLTGPIFYLYL
S

Specific function: Unknown

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=124, Percent_Identity=37.9032258064516, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=41.8803418803419, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 35990; Mature: 35990

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VPLVLLLIFLEFKSYLFINILIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
YVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVNFLSQATSIIFILIYPGILMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
FVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL
HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH
FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GALDSIDSYLLTGPIFYLYLS
CCHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MLIVNLFFQMFYGQIILFFIMREIWNVLRIGRETLGDKGLFSIRSKKLTFVARLGTFLFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VPLVLLLIFLEFKSYLFINILIFMFSGIAAKEVNDLLKFKSASVSSTLSFFLGIFPPILT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
YVHFNILDLGINIVFYLVITLVFSNWIVNLVFIKENEIVNFLSQATSIIFILIYPGILMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
FVVAITTLPKAPILLLILFSMVSGNDTFAYLFGYFFGKNSYKPTIISPNKTIMGFFGGIL
HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH
FSVIVVLIVVSLGLINLTYGEAMVFGVLIGFFTIIGDLFESGLKRSAGVKDSGKIIPGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GALDSIDSYLLTGPIFYLYLS
CCHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA