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The map label for this gene is atpD [H]

Identifier: 203284017

GI number: 203284017

Start: 100193

End: 100789

Strand: Reverse

Name: atpD [H]

Synonym: BDU_95

Alternate gene names: 203284017

Gene position: 100789-100193 (Counterclockwise)

Preceding gene: 203284018

Following gene: 203284016

Centisome position: 10.82

GC content: 28.48

Gene sequence:

>597_bases
ATGCCTAAAGTTAAGTTGACAAAAAATGAACTTAAAAAACAAAAAGATGATCTTAAAATGTTTAGTAGGTATTTACCTAC
GTTGCAACTTAAAAAACAACAACTTCATTTGGAAATTAGAAAAGTTAAGGCTTTGAAAGAAGTGAAAAAACTTGAAAGGG
ATAAATTGAAAAGGAATATGAAATTTTGGATTTCGTTATTTGGTGAGAGATTTCCTTTTCAAGATTGGATTCAAATTAAA
AAAGTAAGAAAGGGTTTTACAAACATAGCAGGTATTACTATACCCGTATTTGAGTCAGTTGAATATGAAGATATTAAACA
TGATCTTTTATTGACTCCTTATTGGGTAGATGTGGGCATAGAGGCTATTAAGAACATTATTCAAATAAATGCAGAACTTG
AGGTTTTAGATGAGCAAGCTAATTTATTAGAATTAGAACTTAATATTACTTCTCAAAGAGTAAATTTATTCGAAAAAGTT
ATGATTCCTAATGCTAAAGTTAATATAAAAAAGATTAATGTTTATCTTGGAGATCAACAGACTGCAGCTGTTGTAAGAGG
TAAAATGGCGAAAGCCAGCTTAATTAAAAATAGATGA

Upstream 100 bases:

>100_bases
ATTTGGGTTGGACTATTCTCTCTAGTTGTTTTGAACCTAATGAGACTGGCATTAAAACAGAACTGCTGGAAAAGTATTGG
CCTAAAAATAGGGATTAGAG

Downstream 100 bases:

>100_bases
GGATGTGTTAATGATTGTTAAAATGAAGAAGGTTTTGCTTTTAACTTTATTAAAATATAAAAGAGACTCACTTGAGATCT
TAAGAGAATTGGGAGTTGTT

Product: V-type ATP synthase subunit D

Products: NA

Alternate protein names: V-ATPase subunit D [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPKVKLTKNELKKQKDDLKMFSRYLPTLQLKKQQLHLEIRKVKALKEVKKLERDKLKRNMKFWISLFGERFPFQDWIQIK
KVRKGFTNIAGITIPVFESVEYEDIKHDLLLTPYWVDVGIEAIKNIIQINAELEVLDEQANLLELELNITSQRVNLFEKV
MIPNAKVNIKKINVYLGDQQTAAVVRGKMAKASLIKNR

Sequences:

>Translated_198_residues
MPKVKLTKNELKKQKDDLKMFSRYLPTLQLKKQQLHLEIRKVKALKEVKKLERDKLKRNMKFWISLFGERFPFQDWIQIK
KVRKGFTNIAGITIPVFESVEYEDIKHDLLLTPYWVDVGIEAIKNIIQINAELEVLDEQANLLELELNITSQRVNLFEKV
MIPNAKVNIKKINVYLGDQQTAAVVRGKMAKASLIKNR
>Mature_197_residues
PKVKLTKNELKKQKDDLKMFSRYLPTLQLKKQQLHLEIRKVKALKEVKKLERDKLKRNMKFWISLFGERFPFQDWIQIKK
VRKGFTNIAGITIPVFESVEYEDIKHDLLLTPYWVDVGIEAIKNIIQINAELEVLDEQANLLELELNITSQRVNLFEKVM
IPNAKVNIKKINVYLGDQQTAAVVRGKMAKASLIKNR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002699 [H]

Pfam domain/function: PF01813 ATP-synt_D [H]

EC number: NA

Molecular weight: Translated: 23230; Mature: 23099

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVKLTKNELKKQKDDLKMFSRYLPTLQLKKQQLHLEIRKVKALKEVKKLERDKLKRNM
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFWISLFGERFPFQDWIQIKKVRKGFTNIAGITIPVFESVEYEDIKHDLLLTPYWVDVGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEHCCCCCHHHHCCCCEECCHHHHHHH
EAIKNIIQINAELEVLDEQANLLELELNITSQRVNLFEKVMIPNAKVNIKKINVYLGDQQ
HHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEECCCH
TAAVVRGKMAKASLIKNR
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKVKLTKNELKKQKDDLKMFSRYLPTLQLKKQQLHLEIRKVKALKEVKKLERDKLKRNM
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFWISLFGERFPFQDWIQIKKVRKGFTNIAGITIPVFESVEYEDIKHDLLLTPYWVDVGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEHCCCCCHHHHCCCCEECCHHHHHHH
EAIKNIIQINAELEVLDEQANLLELELNITSQRVNLFEKVMIPNAKVNIKKINVYLGDQQ
HHHHHHHHHCCHHEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEECCCH
TAAVVRGKMAKASLIKNR
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]