| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203283984
Identifier: 203283984
GI number: 203283984
Start: 64441
End: 66426
Strand: Reverse
Name: 203283984
Synonym: BDU_62
Alternate gene names: NA
Gene position: 66426-64441 (Counterclockwise)
Preceding gene: 203283985
Following gene: 203283983
Centisome position: 7.13
GC content: 27.09
Gene sequence:
>1986_bases ATGAATTTTAAGAGATTTTTTATCATGCTTTTGTTTTTTTATTTAAATTTTGGGAGTTTGATGGGTGCTACTATAACTGC GATTGAATATTATCAAAAGGCACAAACATATTATCTTATGCAAAAATATTATGATGCTATTGATGAACTTCTTGAAGCTG TTAAGATTAATCCTAATTATTATGAGGCTTACAAATTTCTTGCTGAAATTTATTATAAATTAAAAATATATAATCAAGCT CAATTTTTTATAGAAAAAGCTTATAAAATGTCAAATAGAGATACCGAATATAAAATTCTTTATGCAAATATATTGCTTAA AAATAATGGAGCATCACAGGCTAAGAAGTTTTATTCTGAGGTTTTATCTAAACAGAAAAATAATATTGATGCTTTAGTGG GGCTTGCTTCAATTTTTGAAGAAGAAGGTTTGCTTATTGCAGCTGCTAATTATTATTTGTCTGTTCTTGAGTATAGTCGA ACAAATTATAGTGCATTTGACCATCTTATGAGCATTTATGAAAAATTAAACATGAATGATAAGGCACAACATTTGATAAA TAAGGTTAGAGGAACTTTTACTTCTTTGCCGGATTTTCATAGGAGAGTTGCAGAATTTTCTATTAAAACTGGTAATTTAG GATCTGCTGAGAAATATGCTCAAAATTATTTAATGTTGTTAAAGACTACTTATAAAGATTTTGGACTTGTTGATGCTTAT CGCTTACTTGCTCTTGTTTATTTGTATCAAGTTAAATATGACGATGCAGTAGATGTGCTTCAAAAAGCAATAGTTATTGA ACAAGATTCTGATGAGCTTTATTATTTACTTGGATATTCTTATTTAAAACTTGGAGAGGTTGATAAGGCTGTTTTTAATT TGGAGAGAGCTAAAAATATGAAAAAAGACTTAGAATTTTATGATATGGCTCTTGAAGAAAGTTTTTTTGTATCTAATTTT AGAAGTGCATTTCAAAAAAATAATAGTACTAATATAGAAATTTCTAAGAGGTATCACAATGAAGGGCTTAAGGCTTTTCA AGATTTAAGTTTAGATGCTGCAATATTTAATGTAAGGAATGCTATTGATATTTATCCTGATAATGATGGGGCTAGATTTT TGCTTGCTAAGATTTATAAATTTATGAAGTTAGATGTAATGGCATATGAAGAACTGTATTATTTGGTTGAACAGAGAAAG GTCACGGATTCTGCAATTTTAGATTTTTATGATATGGTTGCATTTGATATTAGAAGTTCTTTGTTTTTTAAGTATGGTTA TAAAACTATTGGTGATTTGAATAAGCTTTATGATAACCAAACAGTTTACAGAATAGGTATTTTTACTCAAAATGAAAATA AAGTTTTTGGTGCAAATGATTTAATTTTAAAATATGCTGAGAGAATTCTTGATCGTAATTTAAATATAGAAGTGGTTAAT TATAGATTTGATTATAATAAGGATAAAGATTATTTGGTAAGTAGTTTTTCTGAGGAATTTTCTTATGCACGAAATAATAA TCTTGATTTATTTTTAATGTTTGATCTTGATGTAGATGTTTTTCGAAACTTGGCTAGCTTAAAAGTAGATGTTTTTTCAG GTAAAACTGGAGTTAAGGTGAAGACTTTTAGTTATAATTCAGGGGGAGTATTATATTTGAGTAATATTTTAAGTTCTTTC TCTAGAGATTTTAATGATTATTTACCAAAAAAGGGAAAAATACTTCAGATTAAAAAAGATGATGTTTTAATTAATCTTGG GTATGTAAATGATGTAAAATTAGGCGATGTATTTTTAGTTCTTAAAGAGGGAGCTTTAAAATATAATAGTGATAGTGCGA GCTTTATGAGTTATAGTAAATCAGATATTCTTGGGGAAATTTCTATTGAGGAGATAGGTGATTATATTTCTAGAGGAACT TTAAAATCATCTGCACTCTTAAGAGATTATATTCAGGAAGGATATACGGTTTTTATAAAAAAATAG
Upstream 100 bases:
>100_bases TAAAGAATGAGAAGATAGAATATAATAATTTAATTTTTACTATTAAAAATATGCATCAACGAAATATTAAAGTAATAAAG ATTTCCCAAAAGGAAGGTTT
Downstream 100 bases:
>100_bases TTTGACACTTGGTATTAATTAATTTATTATTTAATAATTCTAGTAGACAATAAAAAATGATGGAGGAGTTGTATGAAGTT AGCTATTAATGGCTTTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family Protein
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT LKSSALLRDYIQEGYTVFIKK
Sequences:
>Translated_661_residues MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT LKSSALLRDYIQEGYTVFIKK >Mature_661_residues MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT LKSSALLRDYIQEGYTVFIKK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76966; Mature: 76966
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YEAYKFLAEIYYKLKIYNQAQFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSE HHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHH VLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSRTNYSAFDHLMSIYEKLNMND HHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH KAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY HHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNM HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHH KKDLEFYDMALEESFFVSNFRSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCC AIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRKVTDSAILDFYDMVAFDIRSS CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN HHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCEEEEE YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKV EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCHHHCEEEEECCCCCCEE KTFSYNSGGVLYLSNILSSFSRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLV EEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEE LKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGTLKSSALLRDYIQEGYTVFIK EECCCEEECCCCHHHHHCCHHHCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE K C >Mature Secondary Structure MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH YEAYKFLAEIYYKLKIYNQAQFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSE HHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHH VLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSRTNYSAFDHLMSIYEKLNMND HHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH KAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY HHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNM HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHH KKDLEFYDMALEESFFVSNFRSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCC AIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRKVTDSAILDFYDMVAFDIRSS CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN HHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCEEEEE YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKV EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCHHHCEEEEECCCCCCEE KTFSYNSGGVLYLSNILSSFSRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLV EEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEE LKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGTLKSSALLRDYIQEGYTVFIK EECCCEEECCCCHHHHHCCHHHCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA