Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

Click here to switch to the map view.

The map label for this gene is 203283984

Identifier: 203283984

GI number: 203283984

Start: 64441

End: 66426

Strand: Reverse

Name: 203283984

Synonym: BDU_62

Alternate gene names: NA

Gene position: 66426-64441 (Counterclockwise)

Preceding gene: 203283985

Following gene: 203283983

Centisome position: 7.13

GC content: 27.09

Gene sequence:

>1986_bases
ATGAATTTTAAGAGATTTTTTATCATGCTTTTGTTTTTTTATTTAAATTTTGGGAGTTTGATGGGTGCTACTATAACTGC
GATTGAATATTATCAAAAGGCACAAACATATTATCTTATGCAAAAATATTATGATGCTATTGATGAACTTCTTGAAGCTG
TTAAGATTAATCCTAATTATTATGAGGCTTACAAATTTCTTGCTGAAATTTATTATAAATTAAAAATATATAATCAAGCT
CAATTTTTTATAGAAAAAGCTTATAAAATGTCAAATAGAGATACCGAATATAAAATTCTTTATGCAAATATATTGCTTAA
AAATAATGGAGCATCACAGGCTAAGAAGTTTTATTCTGAGGTTTTATCTAAACAGAAAAATAATATTGATGCTTTAGTGG
GGCTTGCTTCAATTTTTGAAGAAGAAGGTTTGCTTATTGCAGCTGCTAATTATTATTTGTCTGTTCTTGAGTATAGTCGA
ACAAATTATAGTGCATTTGACCATCTTATGAGCATTTATGAAAAATTAAACATGAATGATAAGGCACAACATTTGATAAA
TAAGGTTAGAGGAACTTTTACTTCTTTGCCGGATTTTCATAGGAGAGTTGCAGAATTTTCTATTAAAACTGGTAATTTAG
GATCTGCTGAGAAATATGCTCAAAATTATTTAATGTTGTTAAAGACTACTTATAAAGATTTTGGACTTGTTGATGCTTAT
CGCTTACTTGCTCTTGTTTATTTGTATCAAGTTAAATATGACGATGCAGTAGATGTGCTTCAAAAAGCAATAGTTATTGA
ACAAGATTCTGATGAGCTTTATTATTTACTTGGATATTCTTATTTAAAACTTGGAGAGGTTGATAAGGCTGTTTTTAATT
TGGAGAGAGCTAAAAATATGAAAAAAGACTTAGAATTTTATGATATGGCTCTTGAAGAAAGTTTTTTTGTATCTAATTTT
AGAAGTGCATTTCAAAAAAATAATAGTACTAATATAGAAATTTCTAAGAGGTATCACAATGAAGGGCTTAAGGCTTTTCA
AGATTTAAGTTTAGATGCTGCAATATTTAATGTAAGGAATGCTATTGATATTTATCCTGATAATGATGGGGCTAGATTTT
TGCTTGCTAAGATTTATAAATTTATGAAGTTAGATGTAATGGCATATGAAGAACTGTATTATTTGGTTGAACAGAGAAAG
GTCACGGATTCTGCAATTTTAGATTTTTATGATATGGTTGCATTTGATATTAGAAGTTCTTTGTTTTTTAAGTATGGTTA
TAAAACTATTGGTGATTTGAATAAGCTTTATGATAACCAAACAGTTTACAGAATAGGTATTTTTACTCAAAATGAAAATA
AAGTTTTTGGTGCAAATGATTTAATTTTAAAATATGCTGAGAGAATTCTTGATCGTAATTTAAATATAGAAGTGGTTAAT
TATAGATTTGATTATAATAAGGATAAAGATTATTTGGTAAGTAGTTTTTCTGAGGAATTTTCTTATGCACGAAATAATAA
TCTTGATTTATTTTTAATGTTTGATCTTGATGTAGATGTTTTTCGAAACTTGGCTAGCTTAAAAGTAGATGTTTTTTCAG
GTAAAACTGGAGTTAAGGTGAAGACTTTTAGTTATAATTCAGGGGGAGTATTATATTTGAGTAATATTTTAAGTTCTTTC
TCTAGAGATTTTAATGATTATTTACCAAAAAAGGGAAAAATACTTCAGATTAAAAAAGATGATGTTTTAATTAATCTTGG
GTATGTAAATGATGTAAAATTAGGCGATGTATTTTTAGTTCTTAAAGAGGGAGCTTTAAAATATAATAGTGATAGTGCGA
GCTTTATGAGTTATAGTAAATCAGATATTCTTGGGGAAATTTCTATTGAGGAGATAGGTGATTATATTTCTAGAGGAACT
TTAAAATCATCTGCACTCTTAAGAGATTATATTCAGGAAGGATATACGGTTTTTATAAAAAAATAG

Upstream 100 bases:

>100_bases
TAAAGAATGAGAAGATAGAATATAATAATTTAATTTTTACTATTAAAAATATGCATCAACGAAATATTAAAGTAATAAAG
ATTTCCCAAAAGGAAGGTTT

Downstream 100 bases:

>100_bases
TTTGACACTTGGTATTAATTAATTTATTATTTAATAATTCTAGTAGACAATAAAAAATGATGGAGGAGTTGTATGAAGTT
AGCTATTAATGGCTTTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family Protein

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA
QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR
TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY
RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF
RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK
VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN
YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF
SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT
LKSSALLRDYIQEGYTVFIKK

Sequences:

>Translated_661_residues
MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA
QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR
TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY
RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF
RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK
VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN
YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF
SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT
LKSSALLRDYIQEGYTVFIKK
>Mature_661_residues
MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNYYEAYKFLAEIYYKLKIYNQA
QFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSEVLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSR
TNYSAFDHLMSIYEKLNMNDKAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY
RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNMKKDLEFYDMALEESFFVSNF
RSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRNAIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRK
VTDSAILDFYDMVAFDIRSSLFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN
YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKVKTFSYNSGGVLYLSNILSSF
SRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLVLKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGT
LKSSALLRDYIQEGYTVFIKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76966; Mature: 76966

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
YEAYKFLAEIYYKLKIYNQAQFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSE
HHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHH
VLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSRTNYSAFDHLMSIYEKLNMND
HHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
KAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY
HHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNM
HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHH
KKDLEFYDMALEESFFVSNFRSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCC
AIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRKVTDSAILDFYDMVAFDIRSS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN
HHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCEEEEE
YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKV
EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCHHHCEEEEECCCCCCEE
KTFSYNSGGVLYLSNILSSFSRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLV
EEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEE
LKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGTLKSSALLRDYIQEGYTVFIK
EECCCEEECCCCHHHHHCCHHHCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE
K
C
>Mature Secondary Structure
MNFKRFFIMLLFFYLNFGSLMGATITAIEYYQKAQTYYLMQKYYDAIDELLEAVKINPNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
YEAYKFLAEIYYKLKIYNQAQFFIEKAYKMSNRDTEYKILYANILLKNNGASQAKKFYSE
HHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHH
VLSKQKNNIDALVGLASIFEEEGLLIAAANYYLSVLEYSRTNYSAFDHLMSIYEKLNMND
HHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH
KAQHLINKVRGTFTSLPDFHRRVAEFSIKTGNLGSAEKYAQNYLMLLKTTYKDFGLVDAY
HHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
RLLALVYLYQVKYDDAVDVLQKAIVIEQDSDELYYLLGYSYLKLGEVDKAVFNLERAKNM
HHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEEEECHHHHHHCHHHHHHHHHHHHHHH
KKDLEFYDMALEESFFVSNFRSAFQKNNSTNIEISKRYHNEGLKAFQDLSLDAAIFNVRN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCC
AIDIYPDNDGARFLLAKIYKFMKLDVMAYEELYYLVEQRKVTDSAILDFYDMVAFDIRSS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFFKYGYKTIGDLNKLYDNQTVYRIGIFTQNENKVFGANDLILKYAERILDRNLNIEVVN
HHHHHCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCEEEEE
YRFDYNKDKDYLVSSFSEEFSYARNNNLDLFLMFDLDVDVFRNLASLKVDVFSGKTGVKV
EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCHHHCEEEEECCCCCCEE
KTFSYNSGGVLYLSNILSSFSRDFNDYLPKKGKILQIKKDDVLINLGYVNDVKLGDVFLV
EEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEE
LKEGALKYNSDSASFMSYSKSDILGEISIEEIGDYISRGTLKSSALLRDYIQEGYTVFIK
EECCCEEECCCCHHHHHCCHHHCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA