| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ispG [H]
Identifier: 308535324
GI number: 308535324
Start: 3335590
End: 3336639
Strand: Reverse
Name: ispG [H]
Synonym: NA
Alternate gene names: 308535324
Gene position: 3336639-3335590 (Counterclockwise)
Preceding gene: 197119267
Following gene: 197119263
Centisome position: 72.3
GC content: 61.71
Gene sequence:
>1050_bases ATGAGAAAAACGACCAGGCAGATCATGATAGGGAATATCCCGGTTGGCGGAGGTGCTCCCTGCTCCGTCCAGTCCATGTG CTCAACCGACACCCGTGATGTCGCGGCAACCCTTGGGCAGATCGGCCGGCTTGCCGCCGCCGGATGCGAGATCGTGCGCT GTGCGGTGCCGGATATGGACGCCGCCCTGGCCCTTGCCGCCATAAAGGCCGGCTCCCCCATGCCGCTCATAGCCGACATA CATTTCGACTACAAGCTTGCCTTGAAGGCCCTGGAGTCCGGGGTGGACGGGCTCCGTCTCAACCCCGGCAACATAGGCGA AAAGTGGAAGGTTGCCGAGGTGGTGAAAGCCGCGGCCGAGCGCAACGTTCCCATCCGCATCGGCGTCAACGGCGGTTCGC TGGAAAAGGAACTGCTGGTGAAGTACGGGCACCCGACTCCCGAGGCCATGGTCGAATCGGCGCTGGGGCATGTGCGGATC CTCGAGGAACTGGGCTATCAGCAGATAAAGATATCGATCAAGGTCTCCGACGTATTGCGGACCCTGGAGGCGTACCGGCT TCTTTCCGACGCCGTTGACTACCCTCTGCACATAGGCGTTACCGAGGCCGGAACCATCTTCGCCGGAACCGTCAAGTCCT CCGTAGGTCTGGGAATACTTCTTAACCAGGGGATCGGCGACACCATGCGGGTCTCCCTCACCGGCGATCCGGTTGACGAG GTGCGGGTAGCGTACGACATACTCAAATCGCTCGGTTTGCGGACCCGCGGCATCAACTTCGTCTCCTGCCCCACCTGTGG GCGTTGCCAGGTGAACCTGATACCCGTAGCCGAGGAAGTAGAGCGGCGCCTGGCGCATCTGGATACAACGATCACCGTCG CCGTCATGGGGTGCTCCGTCAACGGACCCGGCGAGGCTCGCGAGGCCGACTTCGGCATAGCCGGGGGTAGGGGAGAAGGG CTTCTCTTTCGGCACGGCGAGATCCTGCGCAAGGTCCCCGAAGCCGAGCTAGCCGATGCCTTGGTGGAAGAAGTCTTAAA AAATCAGTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
NA
Sequences:
>Translated_349_residues MRKTTRQIMIGNIPVGGGAPCSVQSMCSTDTRDVAATLGQIGRLAAAGCEIVRCAVPDMDAALALAAIKAGSPMPLIADI HFDYKLALKALESGVDGLRLNPGNIGEKWKVAEVVKAAAERNVPIRIGVNGGSLEKELLVKYGHPTPEAMVESALGHVRI LEELGYQQIKISIKVSDVLRTLEAYRLLSDAVDYPLHIGVTEAGTIFAGTVKSSVGLGILLNQGIGDTMRVSLTGDPVDE VRVAYDILKSLGLRTRGINFVSCPTCGRCQVNLIPVAEEVERRLAHLDTTITVAVMGCSVNGPGEAREADFGIAGGRGEG LLFRHGEILRKVPEAELADALVEEVLKNQ >Mature_349_residues MRKTTRQIMIGNIPVGGGAPCSVQSMCSTDTRDVAATLGQIGRLAAAGCEIVRCAVPDMDAALALAAIKAGSPMPLIADI HFDYKLALKALESGVDGLRLNPGNIGEKWKVAEVVKAAAERNVPIRIGVNGGSLEKELLVKYGHPTPEAMVESALGHVRI LEELGYQQIKISIKVSDVLRTLEAYRLLSDAVDYPLHIGVTEAGTIFAGTVKSSVGLGILLNQGIGDTMRVSLTGDPVDE VRVAYDILKSLGLRTRGINFVSCPTCGRCQVNLIPVAEEVERRLAHLDTTITVAVMGCSVNGPGEAREADFGIAGGRGEG LLFRHGEILRKVPEAELADALVEEVLKNQ
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=340, Percent_Identity=51.7647058823529, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 37008; Mature: 37008
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTTRQIMIGNIPVGGGAPCSVQSMCSTDTRDVAATLGQIGRLAAAGCEIVRCAVPDMD CCCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCH AALALAAIKAGSPMPLIADIHFDYKLALKALESGVDGLRLNPGNIGEKWKVAEVVKAAAE HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHH RNVPIRIGVNGGSLEKELLVKYGHPTPEAMVESALGHVRILEELGYQQIKISIKVSDVLR CCCCEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHH TLEAYRLLSDAVDYPLHIGVTEAGTIFAGTVKSSVGLGILLNQGIGDTMRVSLTGDPVDE HHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHCCCCEEEEEECCCCCEEEEEECCCCHHH VRVAYDILKSLGLRTRGINFVSCPTCGRCQVNLIPVAEEVERRLAHLDTTITVAVMGCSV HHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCEEEEEEEEECC NGPGEAREADFGIAGGRGEGLLFRHGEILRKVPEAELADALVEEVLKNQ CCCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRKTTRQIMIGNIPVGGGAPCSVQSMCSTDTRDVAATLGQIGRLAAAGCEIVRCAVPDMD CCCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCH AALALAAIKAGSPMPLIADIHFDYKLALKALESGVDGLRLNPGNIGEKWKVAEVVKAAAE HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHH RNVPIRIGVNGGSLEKELLVKYGHPTPEAMVESALGHVRILEELGYQQIKISIKVSDVLR CCCCEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHH TLEAYRLLSDAVDYPLHIGVTEAGTIFAGTVKSSVGLGILLNQGIGDTMRVSLTGDPVDE HHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHCCCCEEEEEECCCCCEEEEEECCCCHHH VRVAYDILKSLGLRTRGINFVSCPTCGRCQVNLIPVAEEVERRLAHLDTTITVAVMGCSV HHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCEEEEEEEEECC NGPGEAREADFGIAGGRGEGLLFRHGEILRKVPEAELADALVEEVLKNQ CCCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA