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The map label for this gene is yfdE [H]

Identifier: 308535321

GI number: 308535321

Start: 3253118

End: 3253939

Strand: Reverse

Name: yfdE [H]

Synonym: NA

Alternate gene names: 308535321

Gene position: 3253939-3253118 (Counterclockwise)

Preceding gene: 197119201

Following gene: 197119199

Centisome position: 70.51

GC content: 67.27

Gene sequence:

>822_bases
ATGAAAATGCTCGCGGGGATAAAGGTGGTGAACCTGGCGGTGAACCTGCCGGGGCCGGCGGCGGCTAGGCGGCTCACGGC
GATGGGAGCGAGCGTGACCAAGGTCGAGCCCCCAACTGGCGACCCGATGCAGAGCTACCAGGCAGCGTGGTACCAGGACA
TGGCGGACGGGCAGAGCGTCGTGCGGCTCGACCTGAAGGCGCCCGCGGACCTGGCACGCCTTGACGCTCTTCTCTCCGAG
GCGGATCTCCTCATTACCGCCACCCGTCCGGCAGCCCTGGAGCGGCGGGGGCTTGGCTGGAAGAGCTTGCACGAGAAGCA
CCCCGTCCTTTGTCAGGTGGCCATCGTTGGCTACCCCGCCCCTCGGGAGAACGAGGCGGGGCACGACCTGACCTACCAGG
CGTCCCTGGGCCTTTTGACCCCGCCCCACATGCCGCGCACCCTTTTGGCGGACATGGCCGGCGCCGAGCAGACCTTGAGC
GGCGCGCTGGCGCTATTGCTGGGACGCGAGCGCGGGCTGGGGAGCGGGTACCTGGAGGTGGCCCTTTCCTCCGCAGCGGA
GGCCATGGCCGAGCCGCTTCGCTACGGCTGCACCGTCCCCGGCGCCACTCTTGGCGGGGGATTGCCTGAGTACAACCTCT
ACGCAGCGAGCGACGGCTGGGTTGCCGTTGCGGCGCTTGAGCCGCACTTCAAGAAAAGGATCGAGGAGACGCTTGGAATC
GGCGGCGACGAAGGGTACCGCGCCGCTTTCGCCGAAAAAAGCGCGGCAAATTGGCAACAGTGGGGGCAGGAAAACGATGT
GCCGATAGTCGCTTTGGCGTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:
NA

Sequences:

>Translated_273_residues
MKMLAGIKVVNLAVNLPGPAAARRLTAMGASVTKVEPPTGDPMQSYQAAWYQDMADGQSVVRLDLKAPADLARLDALLSE
ADLLITATRPAALERRGLGWKSLHEKHPVLCQVAIVGYPAPRENEAGHDLTYQASLGLLTPPHMPRTLLADMAGAEQTLS
GALALLLGRERGLGSGYLEVALSSAAEAMAEPLRYGCTVPGATLGGGLPEYNLYAASDGWVAVAALEPHFKKRIEETLGI
GGDEGYRAAFAEKSAANWQQWGQENDVPIVALA
>Mature_273_residues
MKMLAGIKVVNLAVNLPGPAAARRLTAMGASVTKVEPPTGDPMQSYQAAWYQDMADGQSVVRLDLKAPADLARLDALLSE
ADLLITATRPAALERRGLGWKSLHEKHPVLCQVAIVGYPAPRENEAGHDLTYQASLGLLTPPHMPRTLLADMAGAEQTLS
GALALLLGRERGLGSGYLEVALSSAAEAMAEPLRYGCTVPGATLGGGLPEYNLYAASDGWVAVAALEPHFKKRIEETLGI
GGDEGYRAAFAEKSAANWQQWGQENDVPIVALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI42794625, Length=293, Percent_Identity=29.0102389078498, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI266456254, Length=293, Percent_Identity=29.0102389078498, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI266458393, Length=257, Percent_Identity=29.5719844357977, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI266458397, Length=248, Percent_Identity=29.8387096774194, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI300863128, Length=254, Percent_Identity=23.2283464566929, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI300863124, Length=254, Percent_Identity=23.2283464566929, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082093, Length=204, Percent_Identity=29.9019607843137, Blast_Score=93, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115535051, Length=300, Percent_Identity=27.3333333333333, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI32564160, Length=286, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24585488, Length=297, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 28862; Mature: 28862

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLAGIKVVNLAVNLPGPAAARRLTAMGASVTKVEPPTGDPMQSYQAAWYQDMADGQSV
CCCHHCEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEE
VRLDLKAPADLARLDALLSEADLLITATRPAALERRGLGWKSLHEKHPVLCQVAIVGYPA
EEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHCCCCEEEEEEEECCC
PRENEAGHDLTYQASLGLLTPPHMPRTLLADMAGAEQTLSGALALLLGRERGLGSGYLEV
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ALSSAAEAMAEPLRYGCTVPGATLGGGLPEYNLYAASDGWVAVAALEPHFKKRIEETLGI
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHCC
GGDEGYRAAFAEKSAANWQQWGQENDVPIVALA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC
>Mature Secondary Structure
MKMLAGIKVVNLAVNLPGPAAARRLTAMGASVTKVEPPTGDPMQSYQAAWYQDMADGQSV
CCCHHCEEEEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEE
VRLDLKAPADLARLDALLSEADLLITATRPAALERRGLGWKSLHEKHPVLCQVAIVGYPA
EEEECCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCHHHHHHCCCCEEEEEEEECCC
PRENEAGHDLTYQASLGLLTPPHMPRTLLADMAGAEQTLSGALALLLGRERGLGSGYLEV
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
ALSSAAEAMAEPLRYGCTVPGATLGGGLPEYNLYAASDGWVAVAALEPHFKKRIEETLGI
HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHCC
GGDEGYRAAFAEKSAANWQQWGQENDVPIVALA
CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]