Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 308535240

Identifier: 308535240

GI number: 308535240

Start: 1688509

End: 1689411

Strand: Direct

Name: 308535240

Synonym: NA

Alternate gene names: NA

Gene position: 1688509-1689411 (Clockwise)

Preceding gene: 197117844

Following gene: 197117847

Centisome position: 36.59

GC content: 62.9

Gene sequence:

>903_bases
TTGTTGACCAGATCGGGAGTCGAACAAGGGAGCGCTCCGGCCCAGGGGGCCGGTTTCATCGACGTGCACACGCACTGCTT
CACCGGCAGCGCCCGGGCGCAGCAGGTGCTGGAGCAAAGCGGAGAGCTGCGCCGGAGCGGCTTCTCCCACATTGTCGCCA
TCGGCATGGTCAACACCCGCCTGAGTCATGAGGAAATCAGGAACCTGATTCCCGACTGGGTCGAAAACCGGGGCAACCCC
CTGTACCACGAGCTGGACGAGCTTTTGGAGCACGCCCGCCGCTCCGACGGCTTCATCATTCCGTTGGTCGACACCCGTGC
CCTTTGGGGCGACGTTGCCGGCACCCTCAGCGGCTACATCGAGCAGGGGGTGCGCGGCATCAAGGGGATCTGGCTCACCG
ACGTAAACGACATCGGGGTGAAGGGGGTCCCGAAGACCTTCGGCATCACGCTCAAGGAATACCGGCGGCGCGAGTGGGAG
ATCTTCTCCTACGCGCAGGAAAACGACCTGCCGCTGCTCTACCACATGGACGCCCGCGAGCATGCCGACACTATGGCCGC
AATGGTGCAGGACTTCCCCCGGGTGCGGGTGAACTTCCCGCATTTCGGCATCGGCCGCAAGCCGTTCGCGAAGATCCTCG
ACGACCACCCGGGGGTCTACACCGATATGGCGAACCTGCTCCCCCACCTGAAGAAGAACCCGGAAAGCTACCGGGACTTC
ATCATTCATTACCAGGACCAAGTCTGCCTGGGGAGCGACACCTTCATGTACGACTTGGGCGCCATCGTCCAGTACCTGGA
AGCCCTGCGCGGGCTCGGCTTATCCGAAGAAGTGCTGCACAAGGTCTGCAGCGTCAACCCCAGGGCCTTTCTGGGCAAGG
CGCTGCCACAAGCAACCCTCTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:
NA

Sequences:

>Translated_300_residues
MLTRSGVEQGSAPAQGAGFIDVHTHCFTGSARAQQVLEQSGELRRSGFSHIVAIGMVNTRLSHEEIRNLIPDWVENRGNP
LYHELDELLEHARRSDGFIIPLVDTRALWGDVAGTLSGYIEQGVRGIKGIWLTDVNDIGVKGVPKTFGITLKEYRRREWE
IFSYAQENDLPLLYHMDAREHADTMAAMVQDFPRVRVNFPHFGIGRKPFAKILDDHPGVYTDMANLLPHLKKNPESYRDF
IIHYQDQVCLGSDTFMYDLGAIVQYLEALRGLGLSEEVLHKVCSVNPRAFLGKALPQATL
>Mature_300_residues
MLTRSGVEQGSAPAQGAGFIDVHTHCFTGSARAQQVLEQSGELRRSGFSHIVAIGMVNTRLSHEEIRNLIPDWVENRGNP
LYHELDELLEHARRSDGFIIPLVDTRALWGDVAGTLSGYIEQGVRGIKGIWLTDVNDIGVKGVPKTFGITLKEYRRREWE
IFSYAQENDLPLLYHMDAREHADTMAAMVQDFPRVRVNFPHFGIGRKPFAKILDDHPGVYTDMANLLPHLKKNPESYRDF
IIHYQDQVCLGSDTFMYDLGAIVQYLEALRGLGLSEEVLHKVCSVNPRAFLGKALPQATL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33752; Mature: 33752

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRSGVEQGSAPAQGAGFIDVHTHCFTGSARAQQVLEQSGELRRSGFSHIVAIGMVNTR
CCCCCCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LSHEEIRNLIPDWVENRGNPLYHELDELLEHARRSDGFIIPLVDTRALWGDVAGTLSGYI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
EQGVRGIKGIWLTDVNDIGVKGVPKTFGITLKEYRRREWEIFSYAQENDLPLLYHMDARE
HHHHHHHCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
HADTMAAMVQDFPRVRVNFPHFGIGRKPFAKILDDHPGVYTDMANLLPHLKKNPESYRDF
HHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
IIHYQDQVCLGSDTFMYDLGAIVQYLEALRGLGLSEEVLHKVCSVNPRAFLGKALPQATL
HHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLTRSGVEQGSAPAQGAGFIDVHTHCFTGSARAQQVLEQSGELRRSGFSHIVAIGMVNTR
CCCCCCCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LSHEEIRNLIPDWVENRGNPLYHELDELLEHARRSDGFIIPLVDTRALWGDVAGTLSGYI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
EQGVRGIKGIWLTDVNDIGVKGVPKTFGITLKEYRRREWEIFSYAQENDLPLLYHMDARE
HHHHHHHCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
HADTMAAMVQDFPRVRVNFPHFGIGRKPFAKILDDHPGVYTDMANLLPHLKKNPESYRDF
HHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
IIHYQDQVCLGSDTFMYDLGAIVQYLEALRGLGLSEEVLHKVCSVNPRAFLGKALPQATL
HHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA