| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535154
Identifier: 308535154
GI number: 308535154
Start: 319465
End: 320448
Strand: Direct
Name: 308535154
Synonym: NA
Alternate gene names: NA
Gene position: 319465-320448 (Clockwise)
Preceding gene: 197116667
Following gene: 197116670
Centisome position: 6.92
GC content: 63.01
Gene sequence:
>984_bases TTGTCAGGCGATAAGGCTATAAGTTGCCGCATGAAAATCGTCCTAGCCCTGTTGCTTCTTGCCCTTTTCTCCTGGCCCTG TCATGCCACCGAGCAATACGCCGCCCAGACCGGCAAGAGCTGCTCGGCCTGCCATCTGGACCCGGCAGGCGGGGGCGAGC TCACCGCCGAGGGGAAGGCGTTTTCGGCCTCGAAAGCTTCGCCCGGCAAAGCTCCCGGCGTTTCCGCACCTGCCAAGGCC CCTAATGTCTCCGCTCCCGCCCAGGCCTCCGGCATCACCGCAGCCGCCAAGGTTTTCCGATTCGTCATCGGTTACATCCA TATGCTGACCGCGATCCTCTGGTTCGGCACCATCCTATACGTGCACCTGGTGTTGAAGCCCGCCTACGCGGCCGGCGGCC TGCCGCGCGGGGAGGTTCGCGTGGGGGTGCTTTCCATGGCGGTCATGGGAATCACCGGAATAGTCCTTACCTACTTCCGC GTAACCTCGTGGGACATGCTGCTGCACACCCGCTTCGGGGTGCTGCTCATGATCAAGATAGGCCTGTACCTGGTGATGGT CTGCACCGCGGCTTACGTGGTGCTCTTCATCGGCCCCAAGCTGAAGGCAAAGCGCAGGGAACCGGCGACGCTCCCGCAGG GAGGGGACCTGACCATCGACGAGCTGGCCTCCTGCGACGGCAAGGAGGGGCGTCCCGCCTGGTTCGCCTACCAGGGGAAG CTCTATGACGCCACCGCGAGCAGGCTCTGGAAGCAGGGTGTGCACATGGGGCGGCACAACGCCGGGGAAGATCTGACCGA AGCGCTGAAGCTCGCGCCGCACGGATCGGAAAAAGTAGCCATCATGCCTGCGGTAGGGGCGCTCGTGGCGCAGACCGACC GCAAGGCTCCGCTGCACGAGCGTGTTTTCTTCTTCATGGCCTACATGAATCTCAGCATCGTTTTCCTCGTGGTGCTGATA CTTGCCCTTTGGCGCTGGGCTTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: copper-binding protein with cytochrome b5 heme/steroid-binding domain
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
NA
Sequences:
>Translated_327_residues MSGDKAISCRMKIVLALLLLALFSWPCHATEQYAAQTGKSCSACHLDPAGGGELTAEGKAFSASKASPGKAPGVSAPAKA PNVSAPAQASGITAAAKVFRFVIGYIHMLTAILWFGTILYVHLVLKPAYAAGGLPRGEVRVGVLSMAVMGITGIVLTYFR VTSWDMLLHTRFGVLLMIKIGLYLVMVCTAAYVVLFIGPKLKAKRREPATLPQGGDLTIDELASCDGKEGRPAWFAYQGK LYDATASRLWKQGVHMGRHNAGEDLTEALKLAPHGSEKVAIMPAVGALVAQTDRKAPLHERVFFFMAYMNLSIVFLVVLI LALWRWA >Mature_326_residues SGDKAISCRMKIVLALLLLALFSWPCHATEQYAAQTGKSCSACHLDPAGGGELTAEGKAFSASKASPGKAPGVSAPAKAP NVSAPAQASGITAAAKVFRFVIGYIHMLTAILWFGTILYVHLVLKPAYAAGGLPRGEVRVGVLSMAVMGITGIVLTYFRV TSWDMLLHTRFGVLLMIKIGLYLVMVCTAAYVVLFIGPKLKAKRREPATLPQGGDLTIDELASCDGKEGRPAWFAYQGKL YDATASRLWKQGVHMGRHNAGEDLTEALKLAPHGSEKVAIMPAVGALVAQTDRKAPLHERVFFFMAYMNLSIVFLVVLIL ALWRWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35117; Mature: 34986
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDKAISCRMKIVLALLLLALFSWPCHATEQYAAQTGKSCSACHLDPAGGGELTAEGKA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEECCCC FSASKASPGKAPGVSAPAKAPNVSAPAQASGITAAAKVFRFVIGYIHMLTAILWFGTILY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHLVLKPAYAAGGLPRGEVRVGVLSMAVMGITGIVLTYFRVTSWDMLLHTRFGVLLMIKI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYLVMVCTAAYVVLFIGPKLKAKRREPATLPQGGDLTIDELASCDGKEGRPAWFAYQGK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCE LYDATASRLWKQGVHMGRHNAGEDLTEALKLAPHGSEKVAIMPAVGALVAQTDRKAPLHE EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCHHH RVFFFMAYMNLSIVFLVVLILALWRWA HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGDKAISCRMKIVLALLLLALFSWPCHATEQYAAQTGKSCSACHLDPAGGGELTAEGKA CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEECCCC FSASKASPGKAPGVSAPAKAPNVSAPAQASGITAAAKVFRFVIGYIHMLTAILWFGTILY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHLVLKPAYAAGGLPRGEVRVGVLSMAVMGITGIVLTYFRVTSWDMLLHTRFGVLLMIKI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYLVMVCTAAYVVLFIGPKLKAKRREPATLPQGGDLTIDELASCDGKEGRPAWFAYQGK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCE LYDATASRLWKQGVHMGRHNAGEDLTEALKLAPHGSEKVAIMPAVGALVAQTDRKAPLHE EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCHHH RVFFFMAYMNLSIVFLVVLILALWRWA HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA