| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535151
Identifier: 308535151
GI number: 308535151
Start: 234368
End: 235207
Strand: Direct
Name: 308535151
Synonym: NA
Alternate gene names: NA
Gene position: 234368-235207 (Clockwise)
Preceding gene: 197116595
Following gene: 197116599
Centisome position: 5.08
GC content: 57.98
Gene sequence:
>840_bases TTGGCTAACTCTCGGCAGCGTGCTGCCGGCTCAAAAAGGACCCGATCCCGCGCAATGAGAATCATAGACCTGCTGGAAAG AAAGCTAGGGCGCTTCGCTATCCCGAATCTGACCCTATATCTGATCGCTGGGCAGTCGTTTTTCTACGTCATGTACCTCA CCGGCAAATTGGAGCGGAGTTCTACCTACTTCTCGGCCGATCTGCTGATGGCGGGAGAGTGGTGGCGCATCTTCACCATC CCTTTCGACCCACCGCGTTCCGGCGTGCTCTTCACGCTGATCGCCTGGTACTTTTTCTACATGCTCGGCTCGGCGCTTGA AGAGTACTGGGGGGCCTTCCGTTACAACGCCTACCTTTTCCTTGGGTGCCTGATCACGCTGGGGGCGTCCTTCCTGGTGC CGGCCTACCCGATCAGCAACGCCTTTCTCGCCGGCTCGGTTTTCCTTGCGTTCGCCGCCTTGTTCCCGGAATTCGAGATC CTGCTCTTCTTCATACTCCCGGTGAAGATCAAGTGGCTTGCCCTGCTCACCTGGCTGGGCTACGCCTACCAGTTCATTTT CGGGGATTGGACGGCGCGGGTGATGGTGCTGGCGGCGACTGCCAACTTCCTGATCTTTTTCGCCAGGGACATCCTGCTGA ATCTGAGGCAGGGGCGGCGGCAGATAGCAAAGAAGGTGGCAAAGGCGCCCAGGAAGGAGCAGCCCCTGACCCACAAGTGC ACCACCTGCGGCATCACCGACAAAACCGACCCCGAGATGGATTTCCGCTACTGCCCCAAGTGCAACGGACAGTACGGCTA CTGCAGGGATCATATTTTCAGCCACGAGCATAAGAAGTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
NA
Sequences:
>Translated_279_residues MANSRQRAAGSKRTRSRAMRIIDLLERKLGRFAIPNLTLYLIAGQSFFYVMYLTGKLERSSTYFSADLLMAGEWWRIFTI PFDPPRSGVLFTLIAWYFFYMLGSALEEYWGAFRYNAYLFLGCLITLGASFLVPAYPISNAFLAGSVFLAFAALFPEFEI LLFFILPVKIKWLALLTWLGYAYQFIFGDWTARVMVLAATANFLIFFARDILLNLRQGRRQIAKKVAKAPRKEQPLTHKC TTCGITDKTDPEMDFRYCPKCNGQYGYCRDHIFSHEHKK >Mature_278_residues ANSRQRAAGSKRTRSRAMRIIDLLERKLGRFAIPNLTLYLIAGQSFFYVMYLTGKLERSSTYFSADLLMAGEWWRIFTIP FDPPRSGVLFTLIAWYFFYMLGSALEEYWGAFRYNAYLFLGCLITLGASFLVPAYPISNAFLAGSVFLAFAALFPEFEIL LFFILPVKIKWLALLTWLGYAYQFIFGDWTARVMVLAATANFLIFFARDILLNLRQGRRQIAKKVAKAPRKEQPLTHKCT TCGITDKTDPEMDFRYCPKCNGQYGYCRDHIFSHEHKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32258; Mature: 32127
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSRQRAAGSKRTRSRAMRIIDLLERKLGRFAIPNLTLYLIAGQSFFYVMYLTGKLERS CCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEECCCCCC STYFSADLLMAGEWWRIFTIPFDPPRSGVLFTLIAWYFFYMLGSALEEYWGAFRYNAYLF CCEEEEHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCLITLGASFLVPAYPISNAFLAGSVFLAFAALFPEFEILLFFILPVKIKWLALLTWLG HHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YAYQFIFGDWTARVMVLAATANFLIFFARDILLNLRQGRRQIAKKVAKAPRKEQPLTHKC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TTCGITDKTDPEMDFRYCPKCNGQYGYCRDHIFSHEHKK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure ANSRQRAAGSKRTRSRAMRIIDLLERKLGRFAIPNLTLYLIAGQSFFYVMYLTGKLERS CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEEECCCCCC STYFSADLLMAGEWWRIFTIPFDPPRSGVLFTLIAWYFFYMLGSALEEYWGAFRYNAYLF CCEEEEHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGCLITLGASFLVPAYPISNAFLAGSVFLAFAALFPEFEILLFFILPVKIKWLALLTWLG HHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YAYQFIFGDWTARVMVLAATANFLIFFARDILLNLRQGRRQIAKKVAKAPRKEQPLTHKC HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TTCGITDKTDPEMDFRYCPKCNGQYGYCRDHIFSHEHKK CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA