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The map label for this gene is iagB [H]

Identifier: 197116595

GI number: 197116595

Start: 230658

End: 231377

Strand: Direct

Name: iagB [H]

Synonym: Gbem_0195

Alternate gene names: 197116595

Gene position: 230658-231377 (Clockwise)

Preceding gene: 197116593

Following gene: 308535151

Centisome position: 5.0

GC content: 58.61

Gene sequence:

>720_bases
ATGACAGGTAAAGCCAAACTGCTTCTTGCGGTTGCCGCCTTGAACCTGGCGCTGGCAAACGATGCTTCCGCCTTCTGTTT
TGAAGAGGCGGGCCAGCAATACGGCATCAATCCGCAGATCCTACGCGCCATAGCCAAGGTCGAATCCAATTTCAACCCCG
CCGCCGTCAACTACAACACCAACGGTTCCTACGATTTCGGGCTGATGCAGATCAACTCCATCTGGGCTCCCACCATCGGC
AAGGAGCGCTGGAACTCGCTCGGCGACCCGTGCAACAGCGTGAAGACCGGCGCTTGGATACTTTCCATGTGCATGGAGAA
GTACGGCTACACCTGGAAGGCCATCGGCTGCTACAACAGTCAGACCCCCGAAAAGCGCGATAAATATTCCAAGAAGGTGT
TCGACCAGTTGCAGCGCGTGAAGCCGTTGAAGCAGGAAGCGGCCTATACGCCGCTCAACAGGAGGATCGAGGACCTGGTA
CGGGACAAGGTTGAGGGCTGGGTCGACGAGGCAGCCCAGGGAAAAGGGGAAGAATTCACCGTGAAGGTGAAAGGGTCGAT
TCCGTCCCCCAAAGAGGTGCTGAAGGAGGAAACCCCTTCCTTGGCAGACTCGTCTCTGCAGAGCGCGCTCCCCGGCAGCA
TCCAGCAGAACTCGCTGGCCCCCAGTGCCGGTGACTCCGGCATGGAACAGGGGGGCACCGCAGCATCCCCCATTCCGTAA

Upstream 100 bases:

>100_bases
TGTGCCCGGCCGCGAACAGAGGCCCGGCCTGACATCCGCAGGTAAAACTCACCTCAGCAAGCCTCCTGCAGATGACCCTA
CACCCCCAAAAGAGGTCCCG

Downstream 100 bases:

>100_bases
TTCAGGCCATCCCTATTTCGGGCCGCATCCCAGGGGCAGCACCCACTTGTGCCCCGGGGGCGGCGCGCCTTCCGTAAGCA
ACACCCGTCTCCCCCCTGCG

Product: lytic transglycosylase, SLT, LysM/LysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MTGKAKLLLAVAALNLALANDASAFCFEEAGQQYGINPQILRAIAKVESNFNPAAVNYNTNGSYDFGLMQINSIWAPTIG
KERWNSLGDPCNSVKTGAWILSMCMEKYGYTWKAIGCYNSQTPEKRDKYSKKVFDQLQRVKPLKQEAAYTPLNRRIEDLV
RDKVEGWVDEAAQGKGEEFTVKVKGSIPSPKEVLKEETPSLADSSLQSALPGSIQQNSLAPSAGDSGMEQGGTAASPIP

Sequences:

>Translated_239_residues
MTGKAKLLLAVAALNLALANDASAFCFEEAGQQYGINPQILRAIAKVESNFNPAAVNYNTNGSYDFGLMQINSIWAPTIG
KERWNSLGDPCNSVKTGAWILSMCMEKYGYTWKAIGCYNSQTPEKRDKYSKKVFDQLQRVKPLKQEAAYTPLNRRIEDLV
RDKVEGWVDEAAQGKGEEFTVKVKGSIPSPKEVLKEETPSLADSSLQSALPGSIQQNSLAPSAGDSGMEQGGTAASPIP
>Mature_238_residues
TGKAKLLLAVAALNLALANDASAFCFEEAGQQYGINPQILRAIAKVESNFNPAAVNYNTNGSYDFGLMQINSIWAPTIGK
ERWNSLGDPCNSVKTGAWILSMCMEKYGYTWKAIGCYNSQTPEKRDKYSKKVFDQLQRVKPLKQEAAYTPLNRRIEDLVR
DKVEGWVDEAAQGKGEEFTVKVKGSIPSPKEVLKEETPSLADSSLQSALPGSIQQNSLAPSAGDSGMEQGGTAASPIP

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 25957; Mature: 25825

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKAKLLLAVAALNLALANDASAFCFEEAGQQYGINPQILRAIAKVESNFNPAAVNYNT
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
NGSYDFGLMQINSIWAPTIGKERWNSLGDPCNSVKTGAWILSMCMEKYGYTWKAIGCYNS
CCCCCEEHEEECCHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
QTPEKRDKYSKKVFDQLQRVKPLKQEAAYTPLNRRIEDLVRDKVEGWVDEAAQGKGEEFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VKVKGSIPSPKEVLKEETPSLADSSLQSALPGSIQQNSLAPSAGDSGMEQGGTAASPIP
EEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
TGKAKLLLAVAALNLALANDASAFCFEEAGQQYGINPQILRAIAKVESNFNPAAVNYNT
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
NGSYDFGLMQINSIWAPTIGKERWNSLGDPCNSVKTGAWILSMCMEKYGYTWKAIGCYNS
CCCCCEEHEEECCHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
QTPEKRDKYSKKVFDQLQRVKPLKQEAAYTPLNRRIEDLVRDKVEGWVDEAAQGKGEEFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VKVKGSIPSPKEVLKEETPSLADSSLQSALPGSIQQNSLAPSAGDSGMEQGGTAASPIP
EEEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7754225; 11677608; 12644504 [H]