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The map label for this gene is dksA [H]

Identifier: 197120362

GI number: 197120362

Start: 4540018

End: 4540374

Strand: Direct

Name: dksA [H]

Synonym: Gbem_4001

Alternate gene names: 197120362

Gene position: 4540018-4540374 (Clockwise)

Preceding gene: 197120361

Following gene: 197120363

Centisome position: 98.37

GC content: 58.26

Gene sequence:

>357_bases
ATGAATACGGAAAAGCTCGAGTACTTCAGAGGTATCCTGCAGGAAGAGAAGAGATCGCTCCTCGAGGAGGCAGGCCGTAC
CGTCTCCGAGATGACCTCCGACACGACCAATTTCCCCGACCCTACCGACAGGGCCACCCAGGAATCGGACCGCACTTTCG
AGTTGAGGATCCGGGACCGGGAGCGGAAGCTGATCGTGAAGATCCAGGAGGCGCTGGCGCGGATAGAGGCTGGAACCTTC
GGCATCTGCGAGGTCTGCGAAGAGGACATCAGCGAGGCGCGTCTCAAGGCACGCCCCGTCACCACGCTCTGCATCGACTG
CAAGATGGAACAAGAAAAGAAAGAACGCTTTCGGTAA

Upstream 100 bases:

>100_bases
GTTTTACCCGCGATTTTTTGTCATTCTCCAGGCAAATTTCACTTTACTAATGGAGAAAAATCCTCTTTAATGCCGAATTG
ATTAGAAAAGGATAGGTGTC

Downstream 100 bases:

>100_bases
CCAACCCAACCCCCTAGAGCTGTCATTTCCTTCGGAGTTCCCATGGCTGGCCGGAAGGGACAAAACCTCCTGGAGCAAGC
ATTAACTATTGCCCAGGCCC

Product: TraR/DksA family zinc finger transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTF
GICEVCEEDISEARLKARPVTTLCIDCKMEQEKKERFR

Sequences:

>Translated_118_residues
MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTF
GICEVCEEDISEARLKARPVTTLCIDCKMEQEKKERFR
>Mature_118_residues
MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDRERKLIVKIQEALARIEAGTF
GICEVCEEDISEARLKARPVTTLCIDCKMEQEKKERFR

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=116, Percent_Identity=49.1379310344828, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 13820; Mature: 13820

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDR
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
ERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKARPVTTLCIDCKMEQEKKERFR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCC
>Mature Secondary Structure
MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDR
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
ERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKARPVTTLCIDCKMEQEKKERFR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8063112 [H]