| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197120363
GI number: 197120363
Start: 4540417
End: 4542714
Strand: Direct
Name: zraS [H]
Synonym: Gbem_4002
Alternate gene names: 197120363
Gene position: 4540417-4542714 (Clockwise)
Preceding gene: 197120362
Following gene: 197120364
Centisome position: 98.38
GC content: 64.19
Gene sequence:
>2298_bases ATGGCTGGCCGGAAGGGACAAAACCTCCTGGAGCAAGCATTAACTATTGCCCAGGCCCCAGGTCGGTCCCATCAGGTCCG CCTCAACAGCCTGCTTCGCCTGGCGGCCCGTTGGCATTCCCTCGCCTCGGCCACCATCTATCTCCCCGATCCCAAAGGGG TGGTGTTGCAGCGTCGCTTCAGCACGCTGGCCACCCCCTCCGGCCACAACTGCCACATCCCTTACGGCGTGGGTCTCGCC GGGCGCACCGCCGCCACCCTTTCACCCCAATCCGCCAGTGCCGACCTGCTTCATCCCGACGAGCCCTGTTCCGGCAACGG CTCCATCGCTGCGCTCCCCCTTTTGGACGGGGACCGGCTCTTCGCCGTGCTGGCGCTGGAGAGCGGCGCCGCGGAAGTCG CCCGGGAAGCCGTCGACGCGGCCGGTACCCTGGCGCCCGTCTTCTCCCTGACCGTAGCCCGCATGGCCGCAGCCGAAGAG GCTGAGGAGGCGCAGCGCAACCTGTCGCTACTTTCGGCGCTGGCCAAGCTCTTGAGCTCGCCGCAGCCGCGCGGGGTGCT GCTGCACCGGTTGATGCAGCTTTGCACCAGTTCCGGCCTCTCCAGTTGCGCCATCGTCCGCTTGAAGCAGAGGAATTCCG GCAAGGAGAGGGTGATCCGGAGCTGCCGCAGGGGAATGGGCGACAAGCTCCCCGACCTGCTGGAAAAAGAAGCTGCCCTG GCGGTCCATGTCTGCGCCACCGAGACCACCTGCGCCGAGGAACTCGGAGACGACTCCAGCTACCGGTACGCCCTCTGCAC CCCGCTGGGAAGCAACGGCGCGGCGCTGGGGACCATGACCCTCTTCGGGGGGCCCGAACTGACCGCGCCCAAGCAGATCG AGCTTGCCGAAACGGTCGCGCGACTTTTGTCCGGCGCCATGGCCGAGGCGATCTGCAAGGAGCAGATCAAGACCTACGAC AGCGAGAACGAGAAGAAGCTGAAAGAGCTGTCCCTTCTCTACCGGATGAGCAACACCATGCTCTCCACCATCCAGCTGAA CAAACTGATCCACCTCACCCTGACCGCGCTCACCTCGGGTCCCACCCCCTTCTTCGACCGGGCCATGCTCTTTCTCACCA ACGAGCGTTCCGGGATGTTGCTCGGCATGCTGGGGGTAACGACGGAGACCTCCCCTTCCCTCTCCAGCCAAAACGGAGGG AGCGACGACCTCCTCTCCAGCCGGTGGGACATCTCCGATGAAGAGATGGCCGCCCAGCGCAACTCCGAATTCTGCCGGCA GGTACAGGGGAGACGGCTTGAGCTGGACGGAACGCTCAACATCGCTTCCCAGGCCGTGCTGGAAAAGAGGCTGATCTACA TCCCCGAAGAAGGCGGCATCGGCGGCCCCCTCCATTCCCGGCGCAGCGCCCTGGCCGCCTCTCCGCTCATCGCGCATGGG CAGGCCGTAGGGGCGGTACTGGTGGACAACGCCCTCACCCACAAGCCGATCAACCAGGAGCACCTGCGTTTCCTGCAGCT CTTCACCAACCAGGCGGGAATGGCCATCGAGAACTCGATGCTCTACAACAAGATCGAGGACGCGAACCATCAGTTGAGCG AGGCGCAGGAGAACCTGCTCCAGAAGGAGCGGCTTGCCGCCATCGGCGAAATGGCCGCCGGCATCGCACACGAGTTGAAG GGGCCGCTGGTCTCCATCGGCGGCTTCGCCGGCAGGCTCGCCAGGAAACTCCCCCAGGACACCAGCGAGTGGGCCCATGC CGACCTGATCGTGCGCGAAGTGCTCCGGTTGGAGGGAATCCTCTCCGAGATCCTGCTCTTTTCGAAGAAAACCACCATCT GTTACACCCGGTGCGACCTCTCCGAGGTCGTGAAGGAGTCGCTCGCCGTGGTCACCCCTCCACTGGAGGAGAAGCAGATC AGCGTGAACGCCAAATTCCCGCGGCATAAGCTCTTGCTTTTGGGGGACGGACAGCAGTTGAAGCAGGTGTTCATCAACAT CATCCTGAACGCCCTCGATGCCATGGGGACAGGGGGGGCGCTGAACATCCAGGTCTCGGCGGCCGAGATGGACGACAAGG AAGCCGTCCAGGTGAAGATATCCGACACCGGCGGCGGCATCCCGCTGGAGTCCTTGAACAGCATCTTCACCCCCTTCTTC ACCACCAAAGGAAGCGGCACCGGCTTGGGGCTCCCCATCGCCAACCGCATCATCACCAACCACGGCGGCAAGATCCAAGT CACCAACAACCCCGGCCTCGGGGTCGAGTTCAGGGTCATCCTGCCCAAGCACTGGTGA
Upstream 100 bases:
>100_bases CACCACGCTCTGCATCGACTGCAAGATGGAACAAGAAAAGAAAGAACGCTTTCGGTAACCAACCCAACCCCCTAGAGCTG TCATTTCCTTCGGAGTTCCC
Downstream 100 bases:
>100_bases CGCGGAATTTCACTTTTCCTCCTCATTTGCTCCTCATTTTTCTCCTAACCTGAAACTAAACGGGACGCAGGTACCGGAAT TTTCAGGCCAAAGGAGAATG
Product: GAF domain-containing sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MAGRKGQNLLEQALTIAQAPGRSHQVRLNSLLRLAARWHSLASATIYLPDPKGVVLQRRFSTLATPSGHNCHIPYGVGLA GRTAATLSPQSASADLLHPDEPCSGNGSIAALPLLDGDRLFAVLALESGAAEVAREAVDAAGTLAPVFSLTVARMAAAEE AEEAQRNLSLLSALAKLLSSPQPRGVLLHRLMQLCTSSGLSSCAIVRLKQRNSGKERVIRSCRRGMGDKLPDLLEKEAAL AVHVCATETTCAEELGDDSSYRYALCTPLGSNGAALGTMTLFGGPELTAPKQIELAETVARLLSGAMAEAICKEQIKTYD SENEKKLKELSLLYRMSNTMLSTIQLNKLIHLTLTALTSGPTPFFDRAMLFLTNERSGMLLGMLGVTTETSPSLSSQNGG SDDLLSSRWDISDEEMAAQRNSEFCRQVQGRRLELDGTLNIASQAVLEKRLIYIPEEGGIGGPLHSRRSALAASPLIAHG QAVGAVLVDNALTHKPINQEHLRFLQLFTNQAGMAIENSMLYNKIEDANHQLSEAQENLLQKERLAAIGEMAAGIAHELK GPLVSIGGFAGRLARKLPQDTSEWAHADLIVREVLRLEGILSEILLFSKKTTICYTRCDLSEVVKESLAVVTPPLEEKQI SVNAKFPRHKLLLLGDGQQLKQVFINIILNALDAMGTGGALNIQVSAAEMDDKEAVQVKISDTGGGIPLESLNSIFTPFF TTKGSGTGLGLPIANRIITNHGGKIQVTNNPGLGVEFRVILPKHW
Sequences:
>Translated_765_residues MAGRKGQNLLEQALTIAQAPGRSHQVRLNSLLRLAARWHSLASATIYLPDPKGVVLQRRFSTLATPSGHNCHIPYGVGLA GRTAATLSPQSASADLLHPDEPCSGNGSIAALPLLDGDRLFAVLALESGAAEVAREAVDAAGTLAPVFSLTVARMAAAEE AEEAQRNLSLLSALAKLLSSPQPRGVLLHRLMQLCTSSGLSSCAIVRLKQRNSGKERVIRSCRRGMGDKLPDLLEKEAAL AVHVCATETTCAEELGDDSSYRYALCTPLGSNGAALGTMTLFGGPELTAPKQIELAETVARLLSGAMAEAICKEQIKTYD SENEKKLKELSLLYRMSNTMLSTIQLNKLIHLTLTALTSGPTPFFDRAMLFLTNERSGMLLGMLGVTTETSPSLSSQNGG SDDLLSSRWDISDEEMAAQRNSEFCRQVQGRRLELDGTLNIASQAVLEKRLIYIPEEGGIGGPLHSRRSALAASPLIAHG QAVGAVLVDNALTHKPINQEHLRFLQLFTNQAGMAIENSMLYNKIEDANHQLSEAQENLLQKERLAAIGEMAAGIAHELK GPLVSIGGFAGRLARKLPQDTSEWAHADLIVREVLRLEGILSEILLFSKKTTICYTRCDLSEVVKESLAVVTPPLEEKQI SVNAKFPRHKLLLLGDGQQLKQVFINIILNALDAMGTGGALNIQVSAAEMDDKEAVQVKISDTGGGIPLESLNSIFTPFF TTKGSGTGLGLPIANRIITNHGGKIQVTNNPGLGVEFRVILPKHW >Mature_764_residues AGRKGQNLLEQALTIAQAPGRSHQVRLNSLLRLAARWHSLASATIYLPDPKGVVLQRRFSTLATPSGHNCHIPYGVGLAG RTAATLSPQSASADLLHPDEPCSGNGSIAALPLLDGDRLFAVLALESGAAEVAREAVDAAGTLAPVFSLTVARMAAAEEA EEAQRNLSLLSALAKLLSSPQPRGVLLHRLMQLCTSSGLSSCAIVRLKQRNSGKERVIRSCRRGMGDKLPDLLEKEAALA VHVCATETTCAEELGDDSSYRYALCTPLGSNGAALGTMTLFGGPELTAPKQIELAETVARLLSGAMAEAICKEQIKTYDS ENEKKLKELSLLYRMSNTMLSTIQLNKLIHLTLTALTSGPTPFFDRAMLFLTNERSGMLLGMLGVTTETSPSLSSQNGGS DDLLSSRWDISDEEMAAQRNSEFCRQVQGRRLELDGTLNIASQAVLEKRLIYIPEEGGIGGPLHSRRSALAASPLIAHGQ AVGAVLVDNALTHKPINQEHLRFLQLFTNQAGMAIENSMLYNKIEDANHQLSEAQENLLQKERLAAIGEMAAGIAHELKG PLVSIGGFAGRLARKLPQDTSEWAHADLIVREVLRLEGILSEILLFSKKTTICYTRCDLSEVVKESLAVVTPPLEEKQIS VNAKFPRHKLLLLGDGQQLKQVFINIILNALDAMGTGGALNIQVSAAEMDDKEAVQVKISDTGGGIPLESLNSIFTPFFT TKGSGTGLGLPIANRIITNHGGKIQVTNNPGLGVEFRVILPKHW
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=35.3711790393013, Blast_Score=149, Evalue=9e-37, Organism=Escherichia coli, GI1788549, Length=229, Percent_Identity=34.4978165938865, Blast_Score=140, Evalue=4e-34, Organism=Escherichia coli, GI1790300, Length=256, Percent_Identity=30.859375, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI145693157, Length=253, Percent_Identity=29.2490118577075, Blast_Score=83, Evalue=8e-17, Organism=Escherichia coli, GI1788713, Length=242, Percent_Identity=28.9256198347107, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI1786912, Length=301, Percent_Identity=26.9102990033223, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1789149, Length=249, Percent_Identity=26.1044176706827, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790346, Length=219, Percent_Identity=26.9406392694064, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=26.9911504424779, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI48994928, Length=112, Percent_Identity=32.1428571428571, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=219, Percent_Identity=27.8538812785388, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82137; Mature: 82005
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRKGQNLLEQALTIAQAPGRSHQVRLNSLLRLAARWHSLASATIYLPDPKGVVLQRRF CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH STLATPSGHNCHIPYGVGLAGRTAATLSPQSASADLLHPDEPCSGNGSIAALPLLDGDRL HHHCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FAVLALESGAAEVAREAVDAAGTLAPVFSLTVARMAAAEEAEEAQRNLSLLSALAKLLSS EEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQPRGVLLHRLMQLCTSSGLSSCAIVRLKQRNSGKERVIRSCRRGMGDKLPDLLEKEAAL CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHE AVHVCATETTCAEELGDDSSYRYALCTPLGSNGAALGTMTLFGGPELTAPKQIELAETVA EEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH RLLSGAMAEAICKEQIKTYDSENEKKLKELSLLYRMSNTMLSTIQLNKLIHLTLTALTSG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC PTPFFDRAMLFLTNERSGMLLGMLGVTTETSPSLSSQNGGSDDLLSSRWDISDEEMAAQR CCCHHHCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH NSEFCRQVQGRRLELDGTLNIASQAVLEKRLIYIPEEGGIGGPLHSRRSALAASPLIAHG HHHHHHHHCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCHHHCC QAVGAVLVDNALTHKPINQEHLRFLQLFTNQAGMAIENSMLYNKIEDANHQLSEAQENLL CHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH QKERLAAIGEMAAGIAHELKGPLVSIGGFAGRLARKLPQDTSEWAHADLIVREVLRLEGI HHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LSEILLFSKKTTICYTRCDLSEVVKESLAVVTPPLEEKQISVNAKFPRHKLLLLGDGQQL HHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCCCCCCEEEEECCCCCEEEEEEECCHHH KQVFINIILNALDAMGTGGALNIQVSAAEMDDKEAVQVKISDTGGGIPLESLNSIFTPFF HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCE TTKGSGTGLGLPIANRIITNHGGKIQVTNNPGLGVEFRVILPKHW ECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCC >Mature Secondary Structure AGRKGQNLLEQALTIAQAPGRSHQVRLNSLLRLAARWHSLASATIYLPDPKGVVLQRRF CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH STLATPSGHNCHIPYGVGLAGRTAATLSPQSASADLLHPDEPCSGNGSIAALPLLDGDRL HHHCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FAVLALESGAAEVAREAVDAAGTLAPVFSLTVARMAAAEEAEEAQRNLSLLSALAKLLSS EEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQPRGVLLHRLMQLCTSSGLSSCAIVRLKQRNSGKERVIRSCRRGMGDKLPDLLEKEAAL CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHE AVHVCATETTCAEELGDDSSYRYALCTPLGSNGAALGTMTLFGGPELTAPKQIELAETVA EEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH RLLSGAMAEAICKEQIKTYDSENEKKLKELSLLYRMSNTMLSTIQLNKLIHLTLTALTSG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC PTPFFDRAMLFLTNERSGMLLGMLGVTTETSPSLSSQNGGSDDLLSSRWDISDEEMAAQR CCCHHHCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH NSEFCRQVQGRRLELDGTLNIASQAVLEKRLIYIPEEGGIGGPLHSRRSALAASPLIAHG HHHHHHHHCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCHHHCC QAVGAVLVDNALTHKPINQEHLRFLQLFTNQAGMAIENSMLYNKIEDANHQLSEAQENLL CHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH QKERLAAIGEMAAGIAHELKGPLVSIGGFAGRLARKLPQDTSEWAHADLIVREVLRLEGI HHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LSEILLFSKKTTICYTRCDLSEVVKESLAVVTPPLEEKQISVNAKFPRHKLLLLGDGQQL HHHHHHHCCCCEEEEEECCHHHHHHHHHHEECCCCCCCEEEEECCCCCEEEEEEECCHHH KQVFINIILNALDAMGTGGALNIQVSAAEMDDKEAVQVKISDTGGGIPLESLNSIFTPFF HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCE TTKGSGTGLGLPIANRIITNHGGKIQVTNNPGLGVEFRVILPKHW ECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]