Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120177

Identifier: 197120177

GI number: 197120177

Start: 4355936

End: 4356787

Strand: Direct

Name: 197120177

Synonym: Gbem_3816

Alternate gene names: NA

Gene position: 4355936-4356787 (Clockwise)

Preceding gene: 197120164

Following gene: 197120179

Centisome position: 94.38

GC content: 58.69

Gene sequence:

>852_bases
ATGAACAAAGAACTCGAAACAGCGATCATGAACGCGGCGGATCTGCCGACCATTCCCATCGTAGCCATAAAGGTAATGCA
ACTGATCGAGAGCGAAAACGCGACGGCGGACGAGCTGGCGAAGATCGTCTCGACCGACCCCGCCGTGGCCGCGCGGGTGC
TCAAGATCTCCAACTCCTCCTTCTACGGCTGCCGCCGACAGATTCAGACCCTTTCCAGCGCCATCGTCATCCTCGGGTTC
AGCACGCTCAGAAGCCTCGTGGTCGCAGCCTCCGTAAAGCAGGTCTACAAGCCTTACGGGCTCACCGAAAAGATGCTCTG
GGAGCACTCCTTCGCGGCAGGCCTCGCCGCCAGAATCATCGCCAACCGCACCCGCATCGCCAACGAGGAGGAGGCGTTCC
TGGCCGGGCTCTTCCACGATATCGGCAAGATCATCATGAATACGCTGGACCGCAACAAGTTCCAGGAAGTGATGCAGCAC
TGCTATAACGAGGGGATCTCCTTCGGACAGGCGGAACGGACCATCTATCCCTTCAGCCATGACGAGGTGGGAGCGTACGT
GATAAAGAAATGGAACTTCCCGGAGATCCTCACCAGCGCCATCCTATACCACCACACGCTGGAGTTCGACGAGTTCGAGG
ATCCGGCCGTGGTCAACCTTACCGCCATCACAGCTTTGGCCGACCTTTTCTGCCTGAAGCTCGGTATCGGGATCAGGGAA
CCCGAGGAGGATATAGATCTGGCGTGCTCGAAACCGGCGCAGCTGCTGAACATCGCACCGGAGACCGTGCAGCAGCTGCT
GGAGACCTTCGACAAGGCGTTCCAGGAAGACAAGGCCCTGTTCGTCAGCTAG

Upstream 100 bases:

>100_bases
GCCCCCCCTTTCAATCATTAAATCCCCGCTTGCCTTACGCTAACGTTTTGGTATATTTTGAAACCTGACCTGCAACCGGC
CAAGCGAGGACAACTCAGGC

Downstream 100 bases:

>100_bases
CTTCAGGAGTCGGGCCCGTCCCCGCTCTCCGCCCCCTCTTCCAGGGAACTGCGCCGCTTTGCTTCTTCTGAGATGCTGAC
GCTGTCCATCCGGTCCGGTT

Product: metal-dependent phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNKELETAIMNAADLPTIPIVAIKVMQLIESENATADELAKIVSTDPAVAARVLKISNSSFYGCRRQIQTLSSAIVILGF
STLRSLVVAASVKQVYKPYGLTEKMLWEHSFAAGLAARIIANRTRIANEEEAFLAGLFHDIGKIIMNTLDRNKFQEVMQH
CYNEGISFGQAERTIYPFSHDEVGAYVIKKWNFPEILTSAILYHHTLEFDEFEDPAVVNLTAITALADLFCLKLGIGIRE
PEEDIDLACSKPAQLLNIAPETVQQLLETFDKAFQEDKALFVS

Sequences:

>Translated_283_residues
MNKELETAIMNAADLPTIPIVAIKVMQLIESENATADELAKIVSTDPAVAARVLKISNSSFYGCRRQIQTLSSAIVILGF
STLRSLVVAASVKQVYKPYGLTEKMLWEHSFAAGLAARIIANRTRIANEEEAFLAGLFHDIGKIIMNTLDRNKFQEVMQH
CYNEGISFGQAERTIYPFSHDEVGAYVIKKWNFPEILTSAILYHHTLEFDEFEDPAVVNLTAITALADLFCLKLGIGIRE
PEEDIDLACSKPAQLLNIAPETVQQLLETFDKAFQEDKALFVS
>Mature_283_residues
MNKELETAIMNAADLPTIPIVAIKVMQLIESENATADELAKIVSTDPAVAARVLKISNSSFYGCRRQIQTLSSAIVILGF
STLRSLVVAASVKQVYKPYGLTEKMLWEHSFAAGLAARIIANRTRIANEEEAFLAGLFHDIGKIIMNTLDRNKFQEVMQH
CYNEGISFGQAERTIYPFSHDEVGAYVIKKWNFPEILTSAILYHHTLEFDEFEDPAVVNLTAITALADLFCLKLGIGIRE
PEEDIDLACSKPAQLLNIAPETVQQLLETFDKAFQEDKALFVS

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 31486; Mature: 31486

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKELETAIMNAADLPTIPIVAIKVMQLIESENATADELAKIVSTDPAVAARVLKISNSS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
FYGCRRQIQTLSSAIVILGFSTLRSLVVAASVKQVYKPYGLTEKMLWEHSFAAGLAARII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ANRTRIANEEEAFLAGLFHDIGKIIMNTLDRNKFQEVMQHCYNEGISFGQAERTIYPFSH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
DEVGAYVIKKWNFPEILTSAILYHHTLEFDEFEDPAVVNLTAITALADLFCLKLGIGIRE
CCCCHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
PEEDIDLACSKPAQLLNIAPETVQQLLETFDKAFQEDKALFVS
CHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKELETAIMNAADLPTIPIVAIKVMQLIESENATADELAKIVSTDPAVAARVLKISNSS
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
FYGCRRQIQTLSSAIVILGFSTLRSLVVAASVKQVYKPYGLTEKMLWEHSFAAGLAARII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ANRTRIANEEEAFLAGLFHDIGKIIMNTLDRNKFQEVMQHCYNEGISFGQAERTIYPFSH
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCEECCCCC
DEVGAYVIKKWNFPEILTSAILYHHTLEFDEFEDPAVVNLTAITALADLFCLKLGIGIRE
CCCCHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
PEEDIDLACSKPAQLLNIAPETVQQLLETFDKAFQEDKALFVS
CHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]