| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ygiN [H]
Identifier: 197120152
GI number: 197120152
Start: 4330704
End: 4331009
Strand: Direct
Name: ygiN [H]
Synonym: Gbem_3791
Alternate gene names: 197120152
Gene position: 4330704-4331009 (Clockwise)
Preceding gene: 197120151
Following gene: 197120153
Centisome position: 93.84
GC content: 56.86
Gene sequence:
>306_bases ATGATCAGCGTAGTAGCTTCGATAACGGTGAAAGAGGGGAAGCGTGAAGAGTTCCTGGAGATCTTCCACGGGAACGTCCC CAAGGTCAGGAATGAGGAAGGGTGCGTCGAATATTTTCCCGCCATCGACGCCGACTCCGGAATCGGGGTGCAAACGCTCG ACCCTCAGGTCGTGACGGTGATGGAAAAGTGGCAAAGCATGGAGGCGCTGCACCGGCATTTGGAGTCGGCGCACATGCTG GAGTATCGGGAAAAGGTGAAGGATCTGGTGGAAGGAGTGTCACTCAAGGTGCTGCGGCAGGCCTGA
Upstream 100 bases:
>100_bases GGTGTTCTTCATCTTCCGGGGCTGACAGAAAGGGCAAAAGAGAGCGCCCCGAGCCGGTTGGGCCGTATCAGATAGTCGAT TAAAATCAGGAGGATTGGAT
Downstream 100 bases:
>100_bases CGGCAACGAGGCGGAGGGGCGCGATGAAAGGGACAAGCTACAAAGGGCTGCGGATGGTCTCCATCATGGAGGGGATGAAG GGGATCATCGTGCTGGCGGC
Product: antibiotic biosynthesis monooxygenase domain-containing protein
Products: NA
Alternate protein names: QuMo [H]
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MISVVASITVKEGKREEFLEIFHGNVPKVRNEEGCVEYFPAIDADSGIGVQTLDPQVVTVMEKWQSMEALHRHLESAHML EYREKVKDLVEGVSLKVLRQA
Sequences:
>Translated_101_residues MISVVASITVKEGKREEFLEIFHGNVPKVRNEEGCVEYFPAIDADSGIGVQTLDPQVVTVMEKWQSMEALHRHLESAHML EYREKVKDLVEGVSLKVLRQA >Mature_101_residues MISVVASITVKEGKREEFLEIFHGNVPKVRNEEGCVEYFPAIDADSGIGVQTLDPQVVTVMEKWQSMEALHRHLESAHML EYREKVKDLVEGVSLKVLRQA
Specific function: Can oxidize menadiol to menadione [H]
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789407, Length=101, Percent_Identity=34.6534653465347, Blast_Score=73, Evalue=3e-15,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007138 - InterPro: IPR011008 [H]
Pfam domain/function: PF03992 ABM [H]
EC number: NA
Molecular weight: Translated: 11451; Mature: 11451
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVVASITVKEGKREEFLEIFHGNVPKVRNEEGCVEYFPAIDADSGIGVQTLDPQVVTV CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCHHHHHH MEKWQSMEALHRHLESAHMLEYREKVKDLVEGVSLKVLRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MISVVASITVKEGKREEFLEIFHGNVPKVRNEEGCVEYFPAIDADSGIGVQTLDPQVVTV CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCHHHHHH MEKWQSMEALHRHLESAHMLEYREKVKDLVEGVSLKVLRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]