Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120153

Identifier: 197120153

GI number: 197120153

Start: 4331033

End: 4331503

Strand: Direct

Name: 197120153

Synonym: Gbem_3792

Alternate gene names: NA

Gene position: 4331033-4331503 (Clockwise)

Preceding gene: 197120152

Following gene: 197120156

Centisome position: 93.84

GC content: 60.93

Gene sequence:

>471_bases
ATGAAAGGGACAAGCTACAAAGGGCTGCGGATGGTCTCCATCATGGAGGGGATGAAGGGGATCATCGTGCTGGCGGCCGG
ATGCGGGGTGCTCACGCTGATCCACAAAGACCTTCACGACATGGCCGTGCAACTGGTTGAGGTCCTGCACATGAACCCGG
CAAGGCACTACCCCTCCATCTTCATCGACACTGCGAACCGCATCACCGAACCGCAACTTTGGCTCCTCGCCCTGTCGGCG
CTTGCCTACTCGGCGGTCCGCCTGGCAGAGGCTTATGGGCTGTGGAAAGAGTGCCCCTGGGCGGAATGGCTCGGCTTTTT
ATCGGGGGGTATCTACCTTCCCGTCGAGATCGTCGAGATCTGGCGCAAGCCCGTCTGGCCCCGCATAGCTGTCTTCATCG
TCAACGTCGCCGTCGTAGGCTACCTCGCCTTGATGCTCAAGCGCCGCAAGGGACGCCCCTACCCCAGGTAA

Upstream 100 bases:

>100_bases
CGCACATGCTGGAGTATCGGGAAAAGGTGAAGGATCTGGTGGAAGGAGTGTCACTCAAGGTGCTGCGGCAGGCCTGACGG
CAACGAGGCGGAGGGGCGCG

Downstream 100 bases:

>100_bases
GGCTTGAGCGCCTCCAGGGACCTCTCCAGATCCTTCATGCTGTGCGCCTCTATGGTGTAGGCCGCGTCGGGGGCGTAGCG
CTCCATCAGGTCGAAGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA
LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR

Sequences:

>Translated_156_residues
MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA
LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR
>Mature_156_residues
MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA
LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR

Specific function: Unknown

COG id: COG3305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17616; Mature: 17616

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSI
CCCCCCCCHHHHHHHCCHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FIDTANRITEPQLWLLALSALAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEI
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHH
WRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSI
CCCCCCCCHHHHHHHCCHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FIDTANRITEPQLWLLALSALAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEI
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHH
WRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA