| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120153
Identifier: 197120153
GI number: 197120153
Start: 4331033
End: 4331503
Strand: Direct
Name: 197120153
Synonym: Gbem_3792
Alternate gene names: NA
Gene position: 4331033-4331503 (Clockwise)
Preceding gene: 197120152
Following gene: 197120156
Centisome position: 93.84
GC content: 60.93
Gene sequence:
>471_bases ATGAAAGGGACAAGCTACAAAGGGCTGCGGATGGTCTCCATCATGGAGGGGATGAAGGGGATCATCGTGCTGGCGGCCGG ATGCGGGGTGCTCACGCTGATCCACAAAGACCTTCACGACATGGCCGTGCAACTGGTTGAGGTCCTGCACATGAACCCGG CAAGGCACTACCCCTCCATCTTCATCGACACTGCGAACCGCATCACCGAACCGCAACTTTGGCTCCTCGCCCTGTCGGCG CTTGCCTACTCGGCGGTCCGCCTGGCAGAGGCTTATGGGCTGTGGAAAGAGTGCCCCTGGGCGGAATGGCTCGGCTTTTT ATCGGGGGGTATCTACCTTCCCGTCGAGATCGTCGAGATCTGGCGCAAGCCCGTCTGGCCCCGCATAGCTGTCTTCATCG TCAACGTCGCCGTCGTAGGCTACCTCGCCTTGATGCTCAAGCGCCGCAAGGGACGCCCCTACCCCAGGTAA
Upstream 100 bases:
>100_bases CGCACATGCTGGAGTATCGGGAAAAGGTGAAGGATCTGGTGGAAGGAGTGTCACTCAAGGTGCTGCGGCAGGCCTGACGG CAACGAGGCGGAGGGGCGCG
Downstream 100 bases:
>100_bases GGCTTGAGCGCCTCCAGGGACCTCTCCAGATCCTTCATGCTGTGCGCCTCTATGGTGTAGGCCGCGTCGGGGGCGTAGCG CTCCATCAGGTCGAAGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR
Sequences:
>Translated_156_residues MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR >Mature_156_residues MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSIFIDTANRITEPQLWLLALSA LAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEIWRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR
Specific function: Unknown
COG id: COG3305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17616; Mature: 17616
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSI CCCCCCCCHHHHHHHCCHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FIDTANRITEPQLWLLALSALAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHH WRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKGTSYKGLRMVSIMEGMKGIIVLAAGCGVLTLIHKDLHDMAVQLVEVLHMNPARHYPSI CCCCCCCCHHHHHHHCCHHHEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FIDTANRITEPQLWLLALSALAYSAVRLAEAYGLWKECPWAEWLGFLSGGIYLPVEIVEI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCHHHHHHHH WRKPVWPRIAVFIVNVAVVGYLALMLKRRKGRPYPR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA