| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197120151
Identifier: 197120151
GI number: 197120151
Start: 4330299
End: 4330628
Strand: Direct
Name: 197120151
Synonym: Gbem_3790
Alternate gene names: NA
Gene position: 4330299-4330628 (Clockwise)
Preceding gene: 197120147
Following gene: 197120152
Centisome position: 93.83
GC content: 56.67
Gene sequence:
>330_bases ATGAGAACCATTGTCCTGCTTGTCTTGTCCAACGTGTTCATGACCTTCGCCTGGTACGCCCACCTGAAGGACCTGCGCAG CGCGCCGGTCTATGTGGCGATTCTGGCCAGTTGGGGGATAGCCCTTTTCGAGTACATGCTGCAGGTCCCGGCGAACCGCG CCGGATACGGTACCTTTAGCCTGGGACAATTAAAAATAATGCAGGAAATTATCACCCTTTCTGTCTTCGTCCCCTTTGCC GTCTTCTACATGGGGCAACCGCTCAAGCTCGACTACCTCTGGGCCGGTTGCTGCATGGCGGGGGCGGTGTTCTTCATCTT CCGGGGCTGA
Upstream 100 bases:
>100_bases GGAACCCGAACAGGGTATTTACAGCACGGAATAATCCCCCGGCAGCCCACCTGGTTCCCAGGTTCTGCTTCAGAAGAAAC CGCTACGAAGAAGGACCGCC
Downstream 100 bases:
>100_bases CAGAAAGGGCAAAAGAGAGCGCCCCGAGCCGGTTGGGCCGTATCAGATAGTCGATTAAAATCAGGAGGATTGGATATGAT CAGCGTAGTAGCTTCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA VFYMGQPLKLDYLWAGCCMAGAVFFIFRG
Sequences:
>Translated_109_residues MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA VFYMGQPLKLDYLWAGCCMAGAVFFIFRG >Mature_109_residues MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA VFYMGQPLKLDYLWAGCCMAGAVFFIFRG
Specific function: Unknown
COG id: COG3169
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12302; Mature: 12302
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LGQLKIMQEIITLSVFVPFAVFYMGQPLKLDYLWAGCCMAGAVFFIFRG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LGQLKIMQEIITLSVFVPFAVFYMGQPLKLDYLWAGCCMAGAVFFIFRG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA