Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120151

Identifier: 197120151

GI number: 197120151

Start: 4330299

End: 4330628

Strand: Direct

Name: 197120151

Synonym: Gbem_3790

Alternate gene names: NA

Gene position: 4330299-4330628 (Clockwise)

Preceding gene: 197120147

Following gene: 197120152

Centisome position: 93.83

GC content: 56.67

Gene sequence:

>330_bases
ATGAGAACCATTGTCCTGCTTGTCTTGTCCAACGTGTTCATGACCTTCGCCTGGTACGCCCACCTGAAGGACCTGCGCAG
CGCGCCGGTCTATGTGGCGATTCTGGCCAGTTGGGGGATAGCCCTTTTCGAGTACATGCTGCAGGTCCCGGCGAACCGCG
CCGGATACGGTACCTTTAGCCTGGGACAATTAAAAATAATGCAGGAAATTATCACCCTTTCTGTCTTCGTCCCCTTTGCC
GTCTTCTACATGGGGCAACCGCTCAAGCTCGACTACCTCTGGGCCGGTTGCTGCATGGCGGGGGCGGTGTTCTTCATCTT
CCGGGGCTGA

Upstream 100 bases:

>100_bases
GGAACCCGAACAGGGTATTTACAGCACGGAATAATCCCCCGGCAGCCCACCTGGTTCCCAGGTTCTGCTTCAGAAGAAAC
CGCTACGAAGAAGGACCGCC

Downstream 100 bases:

>100_bases
CAGAAAGGGCAAAAGAGAGCGCCCCGAGCCGGTTGGGCCGTATCAGATAGTCGATTAAAATCAGGAGGATTGGATATGAT
CAGCGTAGTAGCTTCGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA
VFYMGQPLKLDYLWAGCCMAGAVFFIFRG

Sequences:

>Translated_109_residues
MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA
VFYMGQPLKLDYLWAGCCMAGAVFFIFRG
>Mature_109_residues
MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFSLGQLKIMQEIITLSVFVPFA
VFYMGQPLKLDYLWAGCCMAGAVFFIFRG

Specific function: Unknown

COG id: COG3169

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12302; Mature: 12302

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LGQLKIMQEIITLSVFVPFAVFYMGQPLKLDYLWAGCCMAGAVFFIFRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTIVLLVLSNVFMTFAWYAHLKDLRSAPVYVAILASWGIALFEYMLQVPANRAGYGTFS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LGQLKIMQEIITLSVFVPFAVFYMGQPLKLDYLWAGCCMAGAVFFIFRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA