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The map label for this gene is yfbE [C]

Identifier: 197120095

GI number: 197120095

Start: 4260040

End: 4261281

Strand: Direct

Name: yfbE [C]

Synonym: Gbem_3734

Alternate gene names: 197120095

Gene position: 4260040-4261281 (Clockwise)

Preceding gene: 197120094

Following gene: 197120096

Centisome position: 92.31

GC content: 63.69

Gene sequence:

>1242_bases
ATGGAAAAAGTAAGAACCGCGCCGTTTCCCCCCTACAACCCAATCGGAGAGGAGGAGGCCCGTGCCGCCTACTCCGTCGT
CGCCAAAGGGATGCTCTCCGACTACATCGCCCGCCCAGGAGAGAAGTTCCTGGGAGGGAGCAAGGTGCAGGAGCTGGAGC
GGCGCTGGGCCGAGCACCACGCGGTCAAACACGCGGTCTCCTTCAATACGGCCACCTCAGCGCTTGTCGCGGCCATGGGC
GCCTCCGGCGTCCTCCCCGGCGACGAGGTCGTGGTCATGCCGTACAGCATGTGCATCTCGGCCACCGCCCCCCTCTTCTA
CGACGCGGTGCCGGTATTCGCCGACATCGAGGAGGAGTTCTTCTGCATGGATCCTGCGAGCGTGGCAGCCAAGATCACCC
CTCGAACCCGCGCCATCCTCACGGTGGACCTGTTCGGGCAGTCGGCCGAGATGACCGCGTTGAACGAGATCGCACGCAAG
CACGACCTGAAGGTGATCTGCGACTCGTCCCACGCCCCCGGCTGCGGCTACAACGGCGGCTTTGCCGGCACCTTCGGGGA
CATCGGGGTCTACAGCCTGAACCAGCACAAGATCATCCACTGCGGCGAGGGCGGCATCGCCGTCACCAACGACGACGATC
TGGCACTTAGGCTGCAACTGATCAGAAACCACGCCGAGGCGGTGGTGAACGAGATGGGATACCGGAACCTGACGAACATG
CTGGGGGGGAACTACCGGCTCCCCGAGGTTGAGGCTGCCATTGCCATCGAGCAGTTGAAAAAGCTCCCCCTGCTGCTCAG
GCAGCGCATCGAACTCGCCGACTACCTGACCGAGCGGCTTTCCAAACTCGACTACCTCACCCCCCCCAAGGTCCGCGAGG
GATCCGAGCACGTCTACTACCTCTACCCGATCCGCTTCCACGAGGAAGCCGCCGGGATCTCCCGCGCCGAGTTCGTGCAA
AGGATCAACGAACTAGGGATACCCCTGTACCGGTTCGCGGCGGGCTACATCAAGCCGCTCTACCTGGAGCCGATCTTCGC
CGAGCGTGAGCGGTTCAAGAACGGCTTCCCCTACAACCTGCTCCCTGAGGGGGAGCGTCCCGACTACGGCAAGGGGCTCT
GCCCGGTGACGGAGAGGATGCACGAGAAGGAACTTATCGTGACCGCCTACAACTACCCGCCGCTCACCAGGTCGGACATG
GACGACATCGTGAGTGCCTTCGGGAAGGCGGCCTGCCGGTGA

Upstream 100 bases:

>100_bases
CCGTCAACACCCCGGAGGACTCCTGCCGCAGCAAGGTGATCGTGGAGGCGGTCCGCCTATCATACGACCTGGGCCACGCC
CTGGATATCGGAGAACACCC

Downstream 100 bases:

>100_bases
GCCTCAACCACGTCAAGAGCTACAACGAGGAGATACGGCAGTGGCTCATCAAGGTCGCCGCGCTGGCAGCCGCCATCCCC
AAGGGGAGCCTCGCGCCGAG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MEKVRTAPFPPYNPIGEEEARAAYSVVAKGMLSDYIARPGEKFLGGSKVQELERRWAEHHAVKHAVSFNTATSALVAAMG
ASGVLPGDEVVVMPYSMCISATAPLFYDAVPVFADIEEEFFCMDPASVAAKITPRTRAILTVDLFGQSAEMTALNEIARK
HDLKVICDSSHAPGCGYNGGFAGTFGDIGVYSLNQHKIIHCGEGGIAVTNDDDLALRLQLIRNHAEAVVNEMGYRNLTNM
LGGNYRLPEVEAAIAIEQLKKLPLLLRQRIELADYLTERLSKLDYLTPPKVREGSEHVYYLYPIRFHEEAAGISRAEFVQ
RINELGIPLYRFAAGYIKPLYLEPIFAERERFKNGFPYNLLPEGERPDYGKGLCPVTERMHEKELIVTAYNYPPLTRSDM
DDIVSAFGKAACR

Sequences:

>Translated_413_residues
MEKVRTAPFPPYNPIGEEEARAAYSVVAKGMLSDYIARPGEKFLGGSKVQELERRWAEHHAVKHAVSFNTATSALVAAMG
ASGVLPGDEVVVMPYSMCISATAPLFYDAVPVFADIEEEFFCMDPASVAAKITPRTRAILTVDLFGQSAEMTALNEIARK
HDLKVICDSSHAPGCGYNGGFAGTFGDIGVYSLNQHKIIHCGEGGIAVTNDDDLALRLQLIRNHAEAVVNEMGYRNLTNM
LGGNYRLPEVEAAIAIEQLKKLPLLLRQRIELADYLTERLSKLDYLTPPKVREGSEHVYYLYPIRFHEEAAGISRAEFVQ
RINELGIPLYRFAAGYIKPLYLEPIFAERERFKNGFPYNLLPEGERPDYGKGLCPVTERMHEKELIVTAYNYPPLTRSDM
DDIVSAFGKAACR
>Mature_413_residues
MEKVRTAPFPPYNPIGEEEARAAYSVVAKGMLSDYIARPGEKFLGGSKVQELERRWAEHHAVKHAVSFNTATSALVAAMG
ASGVLPGDEVVVMPYSMCISATAPLFYDAVPVFADIEEEFFCMDPASVAAKITPRTRAILTVDLFGQSAEMTALNEIARK
HDLKVICDSSHAPGCGYNGGFAGTFGDIGVYSLNQHKIIHCGEGGIAVTNDDDLALRLQLIRNHAEAVVNEMGYRNLTNM
LGGNYRLPEVEAAIAIEQLKKLPLLLRQRIELADYLTERLSKLDYLTPPKVREGSEHVYYLYPIRFHEEAAGISRAEFVQ
RINELGIPLYRFAAGYIKPLYLEPIFAERERFKNGFPYNLLPEGERPDYGKGLCPVTERMHEKELIVTAYNYPPLTRSDM
DDIVSAFGKAACR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=412, Percent_Identity=27.4271844660194, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI2367285, Length=275, Percent_Identity=26.5454545454545, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 45873; Mature: 45873

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVRTAPFPPYNPIGEEEARAAYSVVAKGMLSDYIARPGEKFLGGSKVQELERRWAEHH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH
AVKHAVSFNTATSALVAAMGASGVLPGDEVVVMPYSMCISATAPLFYDAVPVFADIEEEF
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHCHHHHHCCCCCE
FCMDPASVAAKITPRTRAILTVDLFGQSAEMTALNEIARKHDLKVICDSSHAPGCGYNGG
EECCHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
FAGTFGDIGVYSLNQHKIIHCGEGGIAVTNDDDLALRLQLIRNHAEAVVNEMGYRNLTNM
CCCCCCCCCEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
LGGNYRLPEVEAAIAIEQLKKLPLLLRQRIELADYLTERLSKLDYLTPPKVREGSEHVYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
LYPIRFHEEAAGISRAEFVQRINELGIPLYRFAAGYIKPLYLEPIFAERERFKNGFPYNL
EEEEEECHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCC
LPEGERPDYGKGLCPVTERMHEKELIVTAYNYPPLTRSDMDDIVSAFGKAACR
CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKVRTAPFPPYNPIGEEEARAAYSVVAKGMLSDYIARPGEKFLGGSKVQELERRWAEHH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH
AVKHAVSFNTATSALVAAMGASGVLPGDEVVVMPYSMCISATAPLFYDAVPVFADIEEEF
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHCHHHHHCCCCCE
FCMDPASVAAKITPRTRAILTVDLFGQSAEMTALNEIARKHDLKVICDSSHAPGCGYNGG
EECCHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
FAGTFGDIGVYSLNQHKIIHCGEGGIAVTNDDDLALRLQLIRNHAEAVVNEMGYRNLTNM
CCCCCCCCCEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
LGGNYRLPEVEAAIAIEQLKKLPLLLRQRIELADYLTERLSKLDYLTPPKVREGSEHVYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
LYPIRFHEEAAGISRAEFVQRINELGIPLYRFAAGYIKPLYLEPIFAERERFKNGFPYNL
EEEEEECHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCC
LPEGERPDYGKGLCPVTERMHEKELIVTAYNYPPLTRSDMDDIVSAFGKAACR
CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]