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The map label for this gene is ycjS [H]

Identifier: 197120094

GI number: 197120094

Start: 4259021

End: 4260052

Strand: Direct

Name: ycjS [H]

Synonym: Gbem_3733

Alternate gene names: 197120094

Gene position: 4259021-4260052 (Clockwise)

Preceding gene: 197120093

Following gene: 197120095

Centisome position: 92.28

GC content: 62.69

Gene sequence:

>1032_bases
ATGCCTAGCCCCCTGTCCGTCGCCATCATCGGTGCTGGGCAGATAGCCGGCGGCTACGACCTCGCCAAGCTCCCCGGCGA
CCCGGGCGTTTACACCCACGCCGGTGCCTACCGGGCCGACGGGAGGTTCCGGCTGGCGACCGTTTGCGACCTCGACGCGT
CCCGTGCCGAGACCTTCCGGCAGCAATGGAACGTGGAAAGGGCAATCTCGGAGGTCCAGGGTGTGGTGAAAAGCTTCCAT
GATGTGGTCAGCGTCTGCACCCCCAACGACTATCACTTCGAAGTGGTCACCGACCTGATCCGGAACGGATCCTGCAAAAC
ACTCTTCGTGGAAAAACCGCTGGCCCTGGAGCTGGCGCAGATGGAAGAGGTGGGGAGAATGGCTCAGGAACAAGGGGTGA
ACGTGGTGGTCAACTTCCAGAGGAGGTTCGACCCGAGCCACCAGGCGATCAGGGAGGACCTTGCGCGCGCGCCCCGCCGC
CTGCTCGCAGCCAACTGTTTCTACATCAAGGGGTTGGAGCACATCGGCAGCACCATGATCGACACGCTGATCTTTCTTTT
GGGTGAGCCCGAACGGGTGCTCGGCTTCCGGCGCGTCTTCAACCCTGCGGTACGGGAGTACAGCTACGATTTCGCATTGA
TGTACGAGGATTTCGGCGTCACCGTCAGGACCGCCGACTCGCCCGCAGCGGATTACCACTACCACATCTTCGAGATCGAC
CTGCTGCTCACCGACCGGCGGGTCACCATCAATGACAACTCCCGCAGCATAGAGACCAGGAGCCTCGGATCCTATGCCTA
CGGCGGAGTAAACACCCTCAACGACCGCGCGCCGGTGCGCACCGGGACGGGGTACCCGCGCTCCATGTGCGGCTGCGTGG
ATTACCTGCACCAAGTGACCACCGGCGTCCGCCCGCACACCGTCAACACCCCGGAGGACTCCTGCCGCAGCAAGGTGATC
GTGGAGGCGGTCCGCCTATCATACGACCTGGGCCACGCCCTGGATATCGGAGAACACCCATGGAAAAAGTAA

Upstream 100 bases:

>100_bases
TTCACCACCCGCGAACTGATCAGGCTCTCCCAGGAATTCCCGGAGCTCTTCCTGAAGACCAAGGGGCTGGTCCAGCGCTC
CGCCCCCTTTATGAAAACCC

Downstream 100 bases:

>100_bases
GAACCGCGCCGTTTCCCCCCTACAACCCAATCGGAGAGGAGGAGGCCCGTGCCGCCTACTCCGTCGTCGCCAAAGGGATG
CTCTCCGACTACATCGCCCG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MPSPLSVAIIGAGQIAGGYDLAKLPGDPGVYTHAGAYRADGRFRLATVCDLDASRAETFRQQWNVERAISEVQGVVKSFH
DVVSVCTPNDYHFEVVTDLIRNGSCKTLFVEKPLALELAQMEEVGRMAQEQGVNVVVNFQRRFDPSHQAIREDLARAPRR
LLAANCFYIKGLEHIGSTMIDTLIFLLGEPERVLGFRRVFNPAVREYSYDFALMYEDFGVTVRTADSPAADYHYHIFEID
LLLTDRRVTINDNSRSIETRSLGSYAYGGVNTLNDRAPVRTGTGYPRSMCGCVDYLHQVTTGVRPHTVNTPEDSCRSKVI
VEAVRLSYDLGHALDIGEHPWKK

Sequences:

>Translated_343_residues
MPSPLSVAIIGAGQIAGGYDLAKLPGDPGVYTHAGAYRADGRFRLATVCDLDASRAETFRQQWNVERAISEVQGVVKSFH
DVVSVCTPNDYHFEVVTDLIRNGSCKTLFVEKPLALELAQMEEVGRMAQEQGVNVVVNFQRRFDPSHQAIREDLARAPRR
LLAANCFYIKGLEHIGSTMIDTLIFLLGEPERVLGFRRVFNPAVREYSYDFALMYEDFGVTVRTADSPAADYHYHIFEID
LLLTDRRVTINDNSRSIETRSLGSYAYGGVNTLNDRAPVRTGTGYPRSMCGCVDYLHQVTTGVRPHTVNTPEDSCRSKVI
VEAVRLSYDLGHALDIGEHPWKK
>Mature_342_residues
PSPLSVAIIGAGQIAGGYDLAKLPGDPGVYTHAGAYRADGRFRLATVCDLDASRAETFRQQWNVERAISEVQGVVKSFHD
VVSVCTPNDYHFEVVTDLIRNGSCKTLFVEKPLALELAQMEEVGRMAQEQGVNVVVNFQRRFDPSHQAIREDLARAPRRL
LAANCFYIKGLEHIGSTMIDTLIFLLGEPERVLGFRRVFNPAVREYSYDFALMYEDFGVTVRTADSPAADYHYHIFEIDL
LLTDRRVTINDNSRSIETRSLGSYAYGGVNTLNDRAPVRTGTGYPRSMCGCVDYLHQVTTGVRPHTVNTPEDSCRSKVIV
EAVRLSYDLGHALDIGEHPWKK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=218, Percent_Identity=31.1926605504587, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38306; Mature: 38175

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPLSVAIIGAGQIAGGYDLAKLPGDPGVYTHAGAYRADGRFRLATVCDLDASRAETFR
CCCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCEECCCCEEEEEEECCCHHHHHHHH
QQWNVERAISEVQGVVKSFHDVVSVCTPNDYHFEVVTDLIRNGSCKTLFVEKPLALELAQ
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHH
MEEVGRMAQEQGVNVVVNFQRRFDPSHQAIREDLARAPRRLLAANCFYIKGLEHIGSTMI
HHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHECCHHHHHHHHH
DTLIFLLGEPERVLGFRRVFNPAVREYSYDFALMYEDFGVTVRTADSPAADYHYHIFEID
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEE
LLLTDRRVTINDNSRSIETRSLGSYAYGGVNTLNDRAPVRTGTGYPRSMCGCVDYLHQVT
EEEECCEEEECCCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TGVRPHTVNTPEDSCRSKVIVEAVRLSYDLGHALDIGEHPWKK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSPLSVAIIGAGQIAGGYDLAKLPGDPGVYTHAGAYRADGRFRLATVCDLDASRAETFR
CCCEEEEEEECCCCCCCCCEECCCCCCCCEECCCCEECCCCEEEEEEECCCHHHHHHHH
QQWNVERAISEVQGVVKSFHDVVSVCTPNDYHFEVVTDLIRNGSCKTLFVEKPLALELAQ
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHH
MEEVGRMAQEQGVNVVVNFQRRFDPSHQAIREDLARAPRRLLAANCFYIKGLEHIGSTMI
HHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHECCHHHHHHHHH
DTLIFLLGEPERVLGFRRVFNPAVREYSYDFALMYEDFGVTVRTADSPAADYHYHIFEID
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEE
LLLTDRRVTINDNSRSIETRSLGSYAYGGVNTLNDRAPVRTGTGYPRSMCGCVDYLHQVT
EEEECCEEEECCCCCEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TGVRPHTVNTPEDSCRSKVIVEAVRLSYDLGHALDIGEHPWKK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]