| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119443
Identifier: 197119443
GI number: 197119443
Start: 3557010
End: 3557219
Strand: Direct
Name: 197119443
Synonym: Gbem_3072
Alternate gene names: NA
Gene position: 3557010-3557219 (Clockwise)
Preceding gene: 197119442
Following gene: 308535347
Centisome position: 77.07
GC content: 60.95
Gene sequence:
>210_bases GTGACTCGGAGGCTCTTACTGCTTTGCGCGCTCGCCTTACTGGCGGGGTGCGAATCGCTGAACGATACGCTGGTGCGGCA GATGTACATCGATCACGGGGTAAGCCGCGAAGTCGGTGACCAGATCAGGGAGGGGCTGGAACGTCGACAAAAGGCTCCTG CCGCGAAACTGCCGAAGGAACCTGCACCGCCTCTTCTTGACCTGGGCTAG
Upstream 100 bases:
>100_bases TCGACGAGAACTGGCACACCTCCCCGGTGCCGCAATGGCAACCGGTGACCGAGGAGGAGATCGAGAAATGGCGGGAAGTA GAGAAGAGGAGAAAGGGTGC
Downstream 100 bases:
>100_bases CTCCTGCAACTCCTCCCACGAACCCACCCTTGTCTCTCAACAGCTTCTATCTTTGAAATGGTCAGAGCGGGAAAGGACCG GGCTTTTTCGGGATGGAGGC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTRRLLLLCALALLAGCESLNDTLVRQMYIDHGVSREVGDQIREGLERRQKAPAAKLPKEPAPPLLDLG
Sequences:
>Translated_69_residues MTRRLLLLCALALLAGCESLNDTLVRQMYIDHGVSREVGDQIREGLERRQKAPAAKLPKEPAPPLLDLG >Mature_68_residues TRRLLLLCALALLAGCESLNDTLVRQMYIDHGVSREVGDQIREGLERRQKAPAAKLPKEPAPPLLDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7622; Mature: 7491
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRLLLLCALALLAGCESLNDTLVRQMYIDHGVSREVGDQIREGLERRQKAPAAKLPKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PAPPLLDLG CCCCCCCCC >Mature Secondary Structure TRRLLLLCALALLAGCESLNDTLVRQMYIDHGVSREVGDQIREGLERRQKAPAAKLPKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PAPPLLDLG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA