Click here to switch to the map view.

The map label for this gene is yciA [C]

Identifier: 197119442

GI number: 197119442

Start: 3556579

End: 3557013

Strand: Direct

Name: yciA [C]

Synonym: Gbem_3071

Alternate gene names: 197119442

Gene position: 3556579-3557013 (Clockwise)

Preceding gene: 308535346

Following gene: 197119443

Centisome position: 77.06

GC content: 60.0

Gene sequence:

>435_bases
ATGGAAAACCGCAAGGCAGAACTGATCGAGACGCTGCTCCCCAAAGACACCAACTCCTACGGCAACATCTTCGGCGGCGT
CATCATGAGCATCATGGACAAAACGGCTGGGGTCGTCTGCTGGCGCTACGCCAGGAAGAGGGTCGTCACCGCCTGCGCCC
ACCGCATCGACTTCCACACCCCGATAAACGTCGGGGAAGTGGTCTATTCGAGAGCGACCATCATCCATGTCGGGCGATCT
TCGATGGAGGTCGAACTGGAAGTGGAAGTGGAAAACGTCACCGACGGCTCCACGCGCCGCGCCGCGAGCGGCCTTTTCAC
CATGGTGGCAGTCGACGAGAACTGGCACACCTCCCCGGTGCCGCAATGGCAACCGGTGACCGAGGAGGAGATCGAGAAAT
GGCGGGAAGTAGAGAAGAGGAGAAAGGGTGCGTGA

Upstream 100 bases:

>100_bases
ACCGCACCGTAAGCAGCATCACCGGAAGACCGATGGAACGGGCCGGCGCCTTCCGGCTGAAAAAGATCATCGCCCAGTCG
CTGGGCGAAGAGGAGTGATA

Downstream 100 bases:

>100_bases
CTCGGAGGCTCTTACTGCTTTGCGCGCTCGCCTTACTGGCGGGGTGCGAATCGCTGAACGATACGCTGGTGCGGCAGATG
TACATCGATCACGGGGTAAG

Product: long-chain acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MENRKAELIETLLPKDTNSYGNIFGGVIMSIMDKTAGVVCWRYARKRVVTACAHRIDFHTPINVGEVVYSRATIIHVGRS
SMEVELEVEVENVTDGSTRRAASGLFTMVAVDENWHTSPVPQWQPVTEEEIEKWREVEKRRKGA

Sequences:

>Translated_144_residues
MENRKAELIETLLPKDTNSYGNIFGGVIMSIMDKTAGVVCWRYARKRVVTACAHRIDFHTPINVGEVVYSRATIIHVGRS
SMEVELEVEVENVTDGSTRRAASGLFTMVAVDENWHTSPVPQWQPVTEEEIEKWREVEKRRKGA
>Mature_144_residues
MENRKAELIETLLPKDTNSYGNIFGGVIMSIMDKTAGVVCWRYARKRVVTACAHRIDFHTPINVGEVVYSRATIIHVGRS
SMEVELEVEVENVTDGSTRRAASGLFTMVAVDENWHTSPVPQWQPVTEEEIEKWREVEKRRKGA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=138, Percent_Identity=35.5072463768116, Blast_Score=92, Evalue=1e-19,
Organism=Homo sapiens, GI32528282, Length=138, Percent_Identity=35.5072463768116, Blast_Score=92, Evalue=1e-19,
Organism=Homo sapiens, GI32528286, Length=138, Percent_Identity=35.5072463768116, Blast_Score=92, Evalue=1e-19,
Organism=Homo sapiens, GI75709208, Length=138, Percent_Identity=35.5072463768116, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787506, Length=112, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 16346; Mature: 16346

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRKAELIETLLPKDTNSYGNIFGGVIMSIMDKTAGVVCWRYARKRVVTACAHRIDFHT
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PINVGEVVYSRATIIHVGRSSMEVELEVEVENVTDGSTRRAASGLFTMVAVDENWHTSPV
CCCHHHHHHHHHEEEEECCCCEEEEEEEEEECCCCCCHHHHHCCEEEEEEECCCCCCCCC
PQWQPVTEEEIEKWREVEKRRKGA
CCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENRKAELIETLLPKDTNSYGNIFGGVIMSIMDKTAGVVCWRYARKRVVTACAHRIDFHT
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PINVGEVVYSRATIIHVGRSSMEVELEVEVENVTDGSTRRAASGLFTMVAVDENWHTSPV
CCCHHHHHHHHHEEEEECCCCEEEEEEEEEECCCCCCHHHHHCCEEEEEEECCCCCCCCC
PQWQPVTEEEIEKWREVEKRRKGA
CCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]