| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is korD
Identifier: 197119271
GI number: 197119271
Start: 3344039
End: 3344233
Strand: Reverse
Name: korD
Synonym: Gbem_2899
Alternate gene names: NA
Gene position: 3344233-3344039 (Counterclockwise)
Preceding gene: 197119272
Following gene: 197119270
Centisome position: 72.46
GC content: 45.64
Gene sequence:
>195_bases ATGGAGAAAAAACTGCCGACAATCGAGATAATCGAGAAGTACTGCAAAGGGTGCCACATCTGTGTGGAATTTTGCCCTAC CAAAGTCTTGGAAATGAAGGGTTTCGTGGCAAGCGTCAAGAACCTTGAGGCTTGCATCAAGTGCATGCAGTGCGAGCTTA GATGCCCTGATTTTGCAATCAAAGTAACGGCTTAA
Upstream 100 bases:
>100_bases AAGGTGCCGGTCAGCGTCGCTTGCATTTTGTTTACAGCATGTGTTATAAACCCATTTTTGCACAGCCCGAAAGGGCCTTT AAGTCAAAGGAGCTACGTGG
Downstream 100 bases:
>100_bases TTATTCTTAGGAGGTATTGAAAGTGGCTAAAAAAGTTGCATTCCTTCAGGGGAACGAAGCTGCCGCACAGGGTGCATTGT ATGCCGGGTGCACTTTCTTC
Product: 2-oxoglutarate:ferredoxin oxidoreductase ferredoxin subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MEKKLPTIEIIEKYCKGCHICVEFCPTKVLEMKGFVASVKNLEACIKCMQCELRCPDFAIKVTA
Sequences:
>Translated_64_residues MEKKLPTIEIIEKYCKGCHICVEFCPTKVLEMKGFVASVKNLEACIKCMQCELRCPDFAIKVTA >Mature_64_residues MEKKLPTIEIIEKYCKGCHICVEFCPTKVLEMKGFVASVKNLEACIKCMQCELRCPDFAIKVTA
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7257; Mature: 7257
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.5 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 17.2 %Cys+Met (Translated Protein) 12.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 17.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKLPTIEIIEKYCKGCHICVEFCPTKVLEMKGFVASVKNLEACIKCMQCELRCPDFAI CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE KVTA EECC >Mature Secondary Structure MEKKLPTIEIIEKYCKGCHICVEFCPTKVLEMKGFVASVKNLEACIKCMQCELRCPDFAI CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE KVTA EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA