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The map label for this gene is ywfM [H]

Identifier: 197119257

GI number: 197119257

Start: 3324349

End: 3325326

Strand: Reverse

Name: ywfM [H]

Synonym: Gbem_2885

Alternate gene names: 197119257

Gene position: 3325326-3324349 (Counterclockwise)

Preceding gene: 197119259

Following gene: 197119254

Centisome position: 72.05

GC content: 60.22

Gene sequence:

>978_bases
ATGCAGTCCATAAACGCTGCCCGGGCCGAGTCGCGCCGCGGGCTACTTCTGATTATGCTTGCCGCAGTCCTGTGGGGCAC
TGTCGGCATTTCCACCAAAACCATTTATCACCTGGCCTCGACCAATCCCCTGTCGATCGGATTCTTCCGGCTCGTATTTT
CCCTCCCTGTGTTGTTCTCGATCTGCTGGGCCAGGCAGGGTAAAGAGATGCTCCACGTTTCCCGCGGCGACCTGGGGCTG
ATGACGCTGATCGGGCTTATGACCGCGCTGTACCAGGTCTGCTACTTCGGCGCCGTTGCGCGTACCGGGGTAGCGGTCGC
GACAGTGGTTACTCTTTGCACGGCGCCGGTCATGGTCGCCGTCATCACCGTCGCATTCACCAGGAAGAGACCTAGCAGGT
CGACGCTGGTAGCCCTTGTAGGTGCTCTATCCGGCACGGCTGTCCTGGTTCTGTTCCAGGACAGGGGACTGGCTCCGCAA
GGTGCCTGTCCCCTTAGGCTAACCGGAGCGGACACCGGTGGCATTGCGCTGGCCATGGTATCCGCCTTCAGCTATGGGCT
GGTCACCCTTATCTCACAGAAACTGGCCGCGCACCGCGACCCTTTTCAGTCCCTCGCCATCAGCTTCAGCGTGGGTGCCG
CCGTGCTCTTCGGTTTCGCAAAAGACATGGTAATGACCTACACCCCTCTAGCCTGGGTGTTGCTCGTCTACCTAGGCACG
ATACCGACAGCTCTCGCCTACGTTCTCTTCTTCAAAGGAATGCGTTCCACTTCGGCAACGGCAGCCAGCATCAGCACCCT
TCTAGAGCCTATGGTGGCGACTATGCTGGCCTGGTTCCTCTTCGGTGAGCGTTTCACCCCCGTGGGGTTTCTGGGGATCG
CCTTACTGGGGGGATCACTGCTGCTGTTGTATCTGGGTGCCACGGCACCCATGCGAAAGGCGGGGAGGGCGACGGTCAGA
GCGGAGGTCTTGAGATAG

Upstream 100 bases:

>100_bases
GTTACCCCCTCCAGTTCGCGTACTGCGTTCCCACTAGAGTTGCGCCTTACTGCCTTGATCTCAGATGTTCCCTTTCAACT
GAGTTTCAAGGAGATTTCCC

Downstream 100 bases:

>100_bases
CAAATACAGCGACTCCGGTGACATTAAGCACCGGGGTCGCTGTGGCGGGGGGGGGCGAGGATAAAGCATGCTTTAAATGT
CCGGATGTCTGGCCTGCCCC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQSINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFSICWARQGKEMLHVSRGDLGL
MTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMVAVITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQ
GACPLRLTGADTGGIALAMVSAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLGT
IPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTPVGFLGIALLGGSLLLLYLGATAPMRKAGRATVR
AEVLR

Sequences:

>Translated_325_residues
MQSINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFSICWARQGKEMLHVSRGDLGL
MTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMVAVITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQ
GACPLRLTGADTGGIALAMVSAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLGT
IPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTPVGFLGIALLGGSLLLLYLGATAPMRKAGRATVR
AEVLR
>Mature_325_residues
MQSINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFSICWARQGKEMLHVSRGDLGL
MTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMVAVITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQ
GACPLRLTGADTGGIALAMVSAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLGT
IPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTPVGFLGIALLGGSLLLLYLGATAPMRKAGRATVR
AEVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34468; Mature: 34468

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFS
CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
ICWARQGKEMLHVSRGDLGLMTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMVA
HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQGACPLRLTGADTGGIALAMV
HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH
SAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLGT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTPVGFLGIALLGGSL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLLYLGATAPMRKAGRATVRAEVLR
HHHHHCCCCCHHHCCCHHHHHHHCC
>Mature Secondary Structure
MQSINAARAESRRGLLLIMLAAVLWGTVGISTKTIYHLASTNPLSIGFFRLVFSLPVLFS
CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHH
ICWARQGKEMLHVSRGDLGLMTLIGLMTALYQVCYFGAVARTGVAVATVVTLCTAPVMVA
HHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VITVAFTRKRPSRSTLVALVGALSGTAVLVLFQDRGLAPQGACPLRLTGADTGGIALAMV
HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH
SAFSYGLVTLISQKLAAHRDPFQSLAISFSVGAAVLFGFAKDMVMTYTPLAWVLLVYLGT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPTALAYVLFFKGMRSTSATAASISTLLEPMVATMLAWFLFGERFTPVGFLGIALLGGSL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLLYLGATAPMRKAGRATVRAEVLR
HHHHHCCCCCHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]