| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yegS [C]
Identifier: 197119225
GI number: 197119225
Start: 3282946
End: 3283911
Strand: Reverse
Name: yegS [C]
Synonym: Gbem_2852
Alternate gene names: 197119225
Gene position: 3283911-3282946 (Counterclockwise)
Preceding gene: 197119229
Following gene: 197119224
Centisome position: 71.16
GC content: 65.73
Gene sequence:
>966_bases TTGACAGTGTCAAACGATACGAACCAGCTCGCGCCGAGCCCCTTCTTCATAGTCATGAACGCCGGCTCCGGAGACAAGGA CGCGGTCCAAAGGGAGGATGCCATCCGCAGCGTCCTTGCCGCGGGGAAGCGTCCTTACCGCCTGTGGCGCGTAAGCGACA TAAGGCGGCTGCCGGAGGCGGCGCGGGAGGCCGTGTTGCTCGCACGGCAGCAGCAGGGAACCGTCGTCGCCGCGGGGGGG GACGGGACCATCAACGCCGTGGTCCGGGAGGTGCTCCCTTCGGGGTCTCCCTTCGGCGTACTCCCCCAGGGTACCTTCAA CTATTTCAGCCGCGCCCACGGGATCCCGCTCGATACCGAAGAGGCCTGTTCCTTGCTGTTGCACGGGGTGCTGCGGCCGG TGCAGGTCGGGCTGGTGAACCAGCGCCCGTTCCTGGTGAATGCAAGCCTGGGCCTTTACCCCAAGCTGCTGGAAAAACGA GAGGTTCATAAGCAGAGATTCGGGCGCAGCAGGTTCGTTGCTGCGCTGTCGGGCCTTGCGACCTTGCTGGCTCCGCCACC GCGGCTGGTGCTGGCCCTCGACGACGGCGCTGGGAGCGACGTGGTGCACATCTGCACCCTGGTAGTCGACAACAACCTGC TGCAACTGCGGCAGGTGGGGCTGCCTGAGGCGCGCGCCGTGCAGCAAGGGGAACTGGCGGCGATCGCGGTGAAGGCTCAA GGGGTGGGACAACTGATCTCAGCCCTGGCACTGGCCGTGCTGGGAAAGCTGGGGGAAGCGGATGCCGTCGAGTCCTTTTC CTTCAAGAGGCTTTCGGTGAAACCGCTGCACGGCGGCAGGCGCATCAAGGTGGCAACGGACGGCGAGGTTACCTGGATGG TTCCTCCGCTGGTGTTCCAGGCAGCACCCGACTCGCTGCTGCTCGTCGTCCCCCGTTCCAAAACGGTGGGGGGAGAGGGG GGGTGA
Upstream 100 bases:
>100_bases CCCTTGATAGCGGGTATGATAGAATTCCAATCTTGCGCCGGCGCTTCGCCCCTTGCTGCCGGGGAATCCGCTGTACACGT TCCGGCCGAAGGAGTCTCTC
Downstream 100 bases:
>100_bases GTGCCATCTTGCATATATCCGACACCCACTTCGGCACGGAAATTCCGGCCGTGGCCGAGGCGCTGCTGCAATTGGCCGGC GACCTGCACCCGGATCTCCT
Product: diacylglycerol kinase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTVSNDTNQLAPSPFFIVMNAGSGDKDAVQREDAIRSVLAAGKRPYRLWRVSDIRRLPEAAREAVLLARQQQGTVVAAGG DGTINAVVREVLPSGSPFGVLPQGTFNYFSRAHGIPLDTEEACSLLLHGVLRPVQVGLVNQRPFLVNASLGLYPKLLEKR EVHKQRFGRSRFVAALSGLATLLAPPPRLVLALDDGAGSDVVHICTLVVDNNLLQLRQVGLPEARAVQQGELAAIAVKAQ GVGQLISALALAVLGKLGEADAVESFSFKRLSVKPLHGGRRIKVATDGEVTWMVPPLVFQAAPDSLLLVVPRSKTVGGEG G
Sequences:
>Translated_321_residues MTVSNDTNQLAPSPFFIVMNAGSGDKDAVQREDAIRSVLAAGKRPYRLWRVSDIRRLPEAAREAVLLARQQQGTVVAAGG DGTINAVVREVLPSGSPFGVLPQGTFNYFSRAHGIPLDTEEACSLLLHGVLRPVQVGLVNQRPFLVNASLGLYPKLLEKR EVHKQRFGRSRFVAALSGLATLLAPPPRLVLALDDGAGSDVVHICTLVVDNNLLQLRQVGLPEARAVQQGELAAIAVKAQ GVGQLISALALAVLGKLGEADAVESFSFKRLSVKPLHGGRRIKVATDGEVTWMVPPLVFQAAPDSLLLVVPRSKTVGGEG G >Mature_320_residues TVSNDTNQLAPSPFFIVMNAGSGDKDAVQREDAIRSVLAAGKRPYRLWRVSDIRRLPEAAREAVLLARQQQGTVVAAGGD GTINAVVREVLPSGSPFGVLPQGTFNYFSRAHGIPLDTEEACSLLLHGVLRPVQVGLVNQRPFLVNASLGLYPKLLEKRE VHKQRFGRSRFVAALSGLATLLAPPPRLVLALDDGAGSDVVHICTLVVDNNLLQLRQVGLPEARAVQQGELAAIAVKAQG VGQLISALALAVLGKLGEADAVESFSFKRLSVKPLHGGRRIKVATDGEVTWMVPPLVFQAAPDSLLLVVPRSKTVGGEGG
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 34127; Mature: 33996
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSNDTNQLAPSPFFIVMNAGSGDKDAVQREDAIRSVLAAGKRPYRLWRVSDIRRLPEA CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH AREAVLLARQQQGTVVAAGGDGTINAVVREVLPSGSPFGVLPQGTFNYFSRAHGIPLDTE HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHH EACSLLLHGVLRPVQVGLVNQRPFLVNASLGLYPKLLEKREVHKQRFGRSRFVAALSGLA HHHHHHHHHHHHHHHCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH TLLAPPPRLVLALDDGAGSDVVHICTLVVDNNLLQLRQVGLPEARAVQQGELAAIAVKAQ HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCEEEEEEECC GVGQLISALALAVLGKLGEADAVESFSFKRLSVKPLHGGRRIKVATDGEVTWMVPPLVFQ CHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEECCCCCEEEEEECCEEEEEECCHHEE AAPDSLLLVVPRSKTVGGEGG CCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TVSNDTNQLAPSPFFIVMNAGSGDKDAVQREDAIRSVLAAGKRPYRLWRVSDIRRLPEA CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH AREAVLLARQQQGTVVAAGGDGTINAVVREVLPSGSPFGVLPQGTFNYFSRAHGIPLDTE HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHH EACSLLLHGVLRPVQVGLVNQRPFLVNASLGLYPKLLEKREVHKQRFGRSRFVAALSGLA HHHHHHHHHHHHHHHCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH TLLAPPPRLVLALDDGAGSDVVHICTLVVDNNLLQLRQVGLPEARAVQQGELAAIAVKAQ HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCEEEEEEECC GVGQLISALALAVLGKLGEADAVESFSFKRLSVKPLHGGRRIKVATDGEVTWMVPPLVFQ CHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEECCCCCEEEEEECCEEEEEECCHHEE AAPDSLLLVVPRSKTVGGEGG CCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]