| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119224
Identifier: 197119224
GI number: 197119224
Start: 3282149
End: 3282949
Strand: Reverse
Name: 197119224
Synonym: Gbem_2851
Alternate gene names: NA
Gene position: 3282949-3282149 (Counterclockwise)
Preceding gene: 197119225
Following gene: 197119223
Centisome position: 71.13
GC content: 63.8
Gene sequence:
>801_bases GTGAGTGCCATCTTGCATATATCCGACACCCACTTCGGCACGGAAATTCCGGCCGTGGCCGAGGCGCTGCTGCAATTGGC CGGCGACCTGCACCCGGATCTCCTGGTGCTCTCAGGGGACGTCACCCAGCGCGCCCGCGGCTGGCAGTTCAAAGCGGCTG TCGACTTTCTGGAGCGTATGCCCGTGCCGCACCTCTTGGTGATCCCCGGGAACCATGACCTCCCTCTTTTCAACATCCTA GGGCGGGTTTTCTCACCCTACGGCAATTTTCAACGCAGCTTCGGCCGCAACCTGGAGCCGGTATTCGAGTCGCAAGAGCT CCTGGTAGTGGGGGCCAACACGACGCGCCCTTCGCGCCACAAGCACGGTGAAGTGTCGCCCCGGCAGATCGAGACGGTGA GCCGCCGTCTCCAGGCGGGCTCGCCCCGGCAACTGCGAGTCGTAGTGGCGCACCAGCCCGTGCGCGCCACCCGGCAAAGC GATGTGAAAAATCTGTTGAGAAACCACCAGTCCGCCATCCACGCCTGGGCCGAAGCCGGCGCCGACTTGATCCTCGGGGG ACACGTTCATCTCCCGCATGTGCGCCTCCTGAAGGAAGTCCACGGGATTCCCCGCGCGGTCTGGTCCGTCCTTGCCGGGA CCGCCGTTTCCCGCCGGGTCCGCGGCGATATTCCCAACTCGGTCAACCTGATCCGCTACCGCAAAGAAGATGAGCCGCGC AGTTGCCTGGTCGAGCGCTGGGACTACGATGCCCGCGGAGTTTTTTGTCTTGCCGGACGGGAGATCCTTCTCCTTCAATA G
Upstream 100 bases:
>100_bases GCGAGGTTACCTGGATGGTTCCTCCGCTGGTGTTCCAGGCAGCACCCGACTCGCTGCTGCTCGTCGTCCCCCGTTCCAAA ACGGTGGGGGGAGAGGGGGG
Downstream 100 bases:
>100_bases GTGATGCATTCGGTGCCTTAGTCCCGCCCCTTTTTTCTCGTCAAAACCGGTGCAGCTCGCTTACAATGGGTTGGCATGTT AAGTAGTTAAGGAGAGGAAT
Product: metallophosphoesterase
Products: NA
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Transcriptional Regulator Icc Related Protein; Ser/Thr Protein Phosphatase Family Protein; Phosphohydrolase Calcineurin-Like Superfamily; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Metallophosphoesterase Protein; Phosphodiesterase
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSAILHISDTHFGTEIPAVAEALLQLAGDLHPDLLVLSGDVTQRARGWQFKAAVDFLERMPVPHLLVIPGNHDLPLFNIL GRVFSPYGNFQRSFGRNLEPVFESQELLVVGANTTRPSRHKHGEVSPRQIETVSRRLQAGSPRQLRVVVAHQPVRATRQS DVKNLLRNHQSAIHAWAEAGADLILGGHVHLPHVRLLKEVHGIPRAVWSVLAGTAVSRRVRGDIPNSVNLIRYRKEDEPR SCLVERWDYDARGVFCLAGREILLLQ
Sequences:
>Translated_266_residues MSAILHISDTHFGTEIPAVAEALLQLAGDLHPDLLVLSGDVTQRARGWQFKAAVDFLERMPVPHLLVIPGNHDLPLFNIL GRVFSPYGNFQRSFGRNLEPVFESQELLVVGANTTRPSRHKHGEVSPRQIETVSRRLQAGSPRQLRVVVAHQPVRATRQS DVKNLLRNHQSAIHAWAEAGADLILGGHVHLPHVRLLKEVHGIPRAVWSVLAGTAVSRRVRGDIPNSVNLIRYRKEDEPR SCLVERWDYDARGVFCLAGREILLLQ >Mature_265_residues SAILHISDTHFGTEIPAVAEALLQLAGDLHPDLLVLSGDVTQRARGWQFKAAVDFLERMPVPHLLVIPGNHDLPLFNILG RVFSPYGNFQRSFGRNLEPVFESQELLVVGANTTRPSRHKHGEVSPRQIETVSRRLQAGSPRQLRVVVAHQPVRATRQSD VKNLLRNHQSAIHAWAEAGADLILGGHVHLPHVRLLKEVHGIPRAVWSVLAGTAVSRRVRGDIPNSVNLIRYRKEDEPRS CLVERWDYDARGVFCLAGREILLLQ
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29750; Mature: 29618
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILHISDTHFGTEIPAVAEALLQLAGDLHPDLLVLSGDVTQRARGWQFKAAVDFLERM CCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHC PVPHLLVIPGNHDLPLFNILGRVFSPYGNFQRSFGRNLEPVFESQELLVVGANTTRPSRH CCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC KHGEVSPRQIETVSRRLQAGSPRQLRVVVAHQPVRATRQSDVKNLLRNHQSAIHAWAEAG CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ADLILGGHVHLPHVRLLKEVHGIPRAVWSVLAGTAVSRRVRGDIPNSVNLIRYRKEDEPR CCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHH SCLVERWDYDARGVFCLAGREILLLQ HHHHHHCCCCCCCEEEEECCEEEEEC >Mature Secondary Structure SAILHISDTHFGTEIPAVAEALLQLAGDLHPDLLVLSGDVTQRARGWQFKAAVDFLERM CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHC PVPHLLVIPGNHDLPLFNILGRVFSPYGNFQRSFGRNLEPVFESQELLVVGANTTRPSRH CCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC KHGEVSPRQIETVSRRLQAGSPRQLRVVVAHQPVRATRQSDVKNLLRNHQSAIHAWAEAG CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ADLILGGHVHLPHVRLLKEVHGIPRAVWSVLAGTAVSRRVRGDIPNSVNLIRYRKEDEPR CCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHH SCLVERWDYDARGVFCLAGREILLLQ HHHHHHCCCCCCCEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA