| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is phoP [H]
Identifier: 197119176
GI number: 197119176
Start: 3232837
End: 3233550
Strand: Direct
Name: phoP [H]
Synonym: Gbem_2803
Alternate gene names: 197119176
Gene position: 3232837-3233550 (Clockwise)
Preceding gene: 197119175
Following gene: 197119183
Centisome position: 70.05
GC content: 62.18
Gene sequence:
>714_bases GTGGCAAGCAAGGTTCTGCTCGTTGACGACGTAAGCATGTTTATCGAACTCGAGAGGGACTACCTGCAGCTCTCCGCTGT GACCGTCTTGACCGCGCGCGACGGCGAGGAGGCCTTCAGGATCTGCAGATTGCAGCGGCCGGACCTGGTTTTCATGGACC TGCACATGCCGATCATGAACGGAGCCGACTGCTGCCGAGAGATCAAGCGCGATAACCGGCTGTCGACCGCCGTGATACTG ATTACCACCGAAGGGAAAGAGGAGGACCGGCAACTCTGCCTGCAGGCCGGGTGCGACGGCTTCCTCACCAAGCCCCTGGA CCGCCACGCGTTTTTAGAGGCGGCCCGCAAGCTACTCCCCGCCATCGACCGGCGCGACCGCAGGGTGAACAGCCGCTTGA ACGTAAAGTTCCGAGCCTTCGGCCTCACCCTTTCGGGGTTCGCCTCCAACCTGAGCCAAAACGGCATGTACGTGGCCGCC GACGTGGAGCTGGAGGAAGATGCGACCGTAGAGATCATCTTCGCTCTCCCCGACCCCTTCGGCGCCATCATCCAGACCAG GGCGCGCGTAGCCTGGCTGAACAGCTCCAAGACCAGAAAGAAGCCGGCGCTCCCCCCGGGGTTCGGCATTGAGTTTCTCT CCATCGCCGAAGGGGAAAGGGAGCAGATCGGCCGCTTCGTGGACAGCCTGGAGCAGACTAGCGCACGAGTTTAG
Upstream 100 bases:
>100_bases GTCAAGGGAGGGGGAGAGCTGGCCAAAGGGGAGTTTTGCGGAGGCTCGGCTGAAGATGTCGCAAATGAAGTTATGCAATG AAGTGACAGGGGGAGCGTAA
Downstream 100 bases:
>100_bases AAAGCTTCTTAAACTCTTCGGTGCCGGCCACGCGCAGCAGTTGGAAGAGCACCGACTCGGTCGAGGTCATGACCACCCCT GCCGCCGTCATGGTCTTAAT
Product: PilZ domain-containing response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVIL ITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAA DVELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV
Sequences:
>Translated_237_residues MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVIL ITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAA DVELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV >Mature_236_residues ASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMNGADCCREIKRDNRLSTAVILI TTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLPAIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAAD VELEEDATVEIIFALPDPFGAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 26606; Mature: 26475
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMN CCCCEEEEECHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC GADCCREIKRDNRLSTAVILITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLP CHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAADVELEEDATVEIIFALPDPF HHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCH GAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV HHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASKVLLVDDVSMFIELERDYLQLSAVTVLTARDGEEAFRICRLQRPDLVFMDLHMPIMN CCCEEEEECHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCC GADCCREIKRDNRLSTAVILITTEGKEEDRQLCLQAGCDGFLTKPLDRHAFLEAARKLLP CHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH AIDRRDRRVNSRLNVKFRAFGLTLSGFASNLSQNGMYVAADVELEEDATVEIIFALPDPF HHHHHHHHCCCEEEEEEEEEEEEHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEECCCCH GAIIQTRARVAWLNSSKTRKKPALPPGFGIEFLSIAEGEREQIGRFVDSLEQTSARV HHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]