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The map label for this gene is yutI [H]

Identifier: 197119169

GI number: 197119169

Start: 3224183

End: 3224404

Strand: Direct

Name: yutI [H]

Synonym: Gbem_2796

Alternate gene names: 197119169

Gene position: 3224183-3224404 (Clockwise)

Preceding gene: 197119168

Following gene: 197119170

Centisome position: 69.86

GC content: 54.5

Gene sequence:

>222_bases
ATGACTGAAGAAGTAAAAGCGATATTGGAACAAATCCGTCCCGCACTGCAGGCAGACGGCGGCGACGTGGAACTTGTTGA
AGTAACGGACGACGGCATTGTCAAAGTACGCCTCGTCGGCGCTTGCGGCCACTGCCCCATGTCCACCATGACTCTCAAGA
TGGGGATCGAAAGAACCATCAAGGAGAAGGTCCCCGGTATCAAGGAAGTCGTCGCGGTATAG

Upstream 100 bases:

>100_bases
ATTAAGACGCTCTCCGAAACTTTCACACCATTCTTTGCATTTATCGTAAAAATCTTATAGACTCGTCCCTGTTGCTAACC
CAGACCAATTGGAGGAGTAA

Downstream 100 bases:

>100_bases
CCGACCGACTCCTTCAGTCCGCAGTACCTGAAGCGCGGAAGTAATGCCATGACGTTATTTCCGCGCTTCTTCGCTTAAAG
AAAGGCAGGCTCGCTAAAGA

Product: thioredoxin/NifU-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTEEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKEKVPGIKEVVAV

Sequences:

>Translated_73_residues
MTEEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKEKVPGIKEVVAV
>Mature_72_residues
TEEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKEKVPGIKEVVAV

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=70, Percent_Identity=50, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 7847; Mature: 7716

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTI
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
KEKVPGIKEVVAV
HHHCCCHHHHHCC
>Mature Secondary Structure 
TEEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTI
CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
KEKVPGIKEVVAV
HHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]